Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SNORA58B-201ENST00000364259 136 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RNU6-45P-201ENST00000384471 107 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 MIR1250-201ENST00000408098 113 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RNU6-101P-201ENST00000410323 104 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RNU6-293P-201ENST00000411259 106 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 TBCAP2-201ENST00000416175 326 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AL160275.3-201ENST00000423876 471 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC000111.2-201ENST00000448200 210 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RN7SL826P-201ENST00000479724 288 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC026979.1-201ENST00000492525 396 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC092436.3-201ENST00000511788 257 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC104136.1-201ENST00000512969 394 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 Y_RNA.721-201ENST00000517207 102 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC022790.1-201ENST00000522872 204 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC021006.3-201ENST00000530771 192 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 AC107068.1-201ENST00000563286 4218 ntBASIC4.56□□□□□ -1.68
RNF111Q6ZNA4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU1-108P-201ENST00000362556 161 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU6-379P-201ENST00000363813 104 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU6-266P-201ENST00000364225 107 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU6-14P-201ENST00000384630 106 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 Y_RNA.556-201ENST00000384677 113 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AL357515.1-201ENST00000402967 542 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AL080315.1-201ENST00000406055 466 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC096664.2-201ENST00000411843 406 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 MRPS18CP6-201ENST00000423587 223 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU7-187P-201ENST00000458985 68 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC010469.1-201ENST00000463864 576 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC104564.1-201ENST00000493028 407 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU4-77P-201ENST00000516692 156 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNA5SP392-201ENST00000516905 112 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU6-388P-201ENST00000517012 105 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RNU6-389P-201ENST00000517048 105 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 RN7SKP234-201ENST00000517173 224 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 MIR3934-201ENST00000579806 107 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 U2.1-201ENST00000618978 145 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 AL022401.1-201ENST00000619498 108 ntBASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF111Q6ZNA4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNA5SP52-201ENST00000362448 134 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 Y_RNA.307-201ENST00000365022 117 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNA5SP151-201ENST00000365632 117 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNU6-842P-201ENST00000384269 107 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNU6-823P-201ENST00000391042 103 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNU6-1109P-201ENST00000391187 107 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNU2-23P-201ENST00000410545 195 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RNU6-55P-201ENST00000411092 107 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RPS27AP12-201ENST00000429552 465 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AC016712.1-201ENST00000431088 378 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AC090774.1-201ENST00000435925 246 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 RPL12P46-201ENST00000436610 195 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 PCNPP5-201ENST00000452246 481 ntBASIC4.54□□□□□ -1.68
RNF111Q6ZNA4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms