Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AP001004.1-201ENST00000582468 324 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AL035411.2-201ENST00000604022 421 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AC106900.2-201ENST00000604994 317 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AL022578.1-201ENST00000439330 1433 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 MTCO1P4-201ENST00000520516 1409 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AC006026.1-201ENST00000444025 1803 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 POLHP1-201ENST00000411806 470 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 ANKRD26P4-201ENST00000455755 950 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 CDC42P1-201ENST00000456658 548 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 RPS27P26-201ENST00000494583 239 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 PRELID3BP4-201ENST00000515476 571 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 OR10AB1P-201ENST00000609613 938 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AC010872.1-201ENST00000624225 675 ntBASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC171Q6TFL3 AL390862.1-201ENST00000635467 1469 ntBASIC1.9□□□□□ -2.1
CCDC171Q6TFL3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CCDC171Q6TFL3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CCDC171Q6TFL3 AC123912.3-201ENST00000600907 1367 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 SDAD1P2-201ENST00000441308 2028 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 SNORA67.5-201ENST00000391036 107 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 U3.29-201ENST00000391296 212 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 VTA1P1-201ENST00000414044 866 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AL392003.1-201ENST00000434394 243 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 RPL23AP76-201ENST00000441860 458 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 PMCHL2-203ENST00000457791 237 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AP000926.3-201ENST00000497201 299 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC020699.1-201ENST00000505161 445 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC067904.2-201ENST00000517322 1283 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 MIR3609-201ENST00000582661 80 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 AC025588.4-201ENST00000615802 908 ntBASIC1.9□□□□□ -2.11
CCDC171Q6TFL3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 CR848007.1-201ENST00000442354 1699 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 SNORA68.1-201ENST00000364537 132 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 U8.10-201ENST00000384260 133 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 RNU2-17P-201ENST00000410290 190 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 PGBD4P6-201ENST00000421501 610 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AL365496.1-201ENST00000426885 215 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC111193.1-201ENST00000504097 155 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC108729.3-201ENST00000513484 108 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 MIR3616-201ENST00000584070 92 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 DPRXP5-201ENST00000604662 539 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 BX248123.2-201ENST00000606318 124 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC004908.2-201ENST00000609090 574 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AL161423.1-201ENST00000613700 262 ntBASIC1.89□□□□□ -2.11
CCDC171Q6TFL3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 MIR378A-201ENST00000362177 66 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 RNU6-661P-201ENST00000362409 107 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 RNU6-1249P-201ENST00000363237 111 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 MIR493-201ENST00000385254 89 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 RNU6-920P-201ENST00000410926 92 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 RPS15AP38-201ENST00000413110 372 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AC009414.1-201ENST00000427200 443 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AL356867.1-201ENST00000429623 299 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AMD1P1-201ENST00000457220 922 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AC139103.1-201ENST00000534696 1030 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 GLYCAM1-201ENST00000546596 285 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 VN1R80P-201ENST00000597126 338 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AL355812.1-201ENST00000603215 216 ntBASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC171Q6TFL3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 RNU1-105P-201ENST00000363470 161 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 MIR1323-201ENST00000408090 73 ntBASIC1.87□□□□□ -2.11
CCDC171Q6TFL3 RPL23AP36-201ENST00000413895 458 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms