Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AL031679.1-201ENST00000400616 525 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL023807.1-201ENST00000407932 359 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC107081.1-201ENST00000414975 361 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 MTND4P3-201ENST00000417829 541 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 GTF2IP3-201ENST00000433887 494 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 UBE2V1P13-201ENST00000436983 439 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC004866.2-201ENST00000438285 481 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC093155.1-201ENST00000440164 826 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC113420.1-201ENST00000507903 571 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 RNA5SP135-201ENST00000517019 125 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 SNORA31.18-201ENST00000517043 134 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC091057.3-201ENST00000602684 733 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL356280.1-201ENST00000603614 379 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL022099.1-201ENST00000604551 712 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AP003973.1-201ENST00000604639 691 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC112220.2-201ENST00000605513 533 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC012443.1-201ENST00000605605 231 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC024060.1-201ENST00000607052 494 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL592148.2-201ENST00000612210 372 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC104763.3-201ENST00000613765 618 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC004852.3-201ENST00000614131 326 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL445984.1-201ENST00000637834 659 ntBASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCD3Q6STE5 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 HMGB1P5-201ENST00000255320 642 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 RNU6-657P-201ENST00000383904 107 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 Y_RNA.408-201ENST00000383987 102 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 SNORA67.4-201ENST00000384688 142 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AL079342.2-201ENST00000403367 482 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 IPO7P1-201ENST00000442031 636 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 EXOSC3P1-201ENST00000448649 500 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC079776.3-201ENST00000450665 370 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 snoU109.4-201ENST00000458953 143 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC104164.3-201ENST00000467363 1258 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC126389.1-201ENST00000477436 290 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC093767.1-201ENST00000504523 156 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 SNORA48.10-201ENST00000516965 160 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC010376.1-201ENST00000522101 334 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC021451.1-201ENST00000523498 1129 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 ATP5F1P5-201ENST00000526403 760 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 DEFB130C-202ENST00000530001 230 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 GAS5-AS1-201ENST00000602767 694 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC097504.2-201ENST00000608088 454 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC024933.1-201ENST00000608472 348 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC005332.10-201ENST00000612725 619 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 AC087821.2-201ENST00000637086 450 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 ZNF663P-202ENST00000641770 1131 ntBASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SMARCD3Q6STE5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMARCD3Q6STE5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 CR848007.1-201ENST00000442354 1699 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 TPTE2P4-201ENST00000258589 1605 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 ANKRD36P1-201ENST00000344424 659 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 RNU6-251P-201ENST00000363235 104 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 RNU5E-10P-201ENST00000363506 118 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 U3.12-201ENST00000364498 214 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 Y_RNA.472-201ENST00000384322 102 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 SNORD65.1-201ENST00000390889 71 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 MTCO1P56-201ENST00000401674 224 ntBASIC2□□□□□ -2.09
SMARCD3Q6STE5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2□□□□□ -2.09
SMARCD3Q6STE5 MTND1P23-201ENST00000416931 372 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms