Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RNU6-302P-201ENST00000365249 107 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 TRAV28-201ENST00000557548 323 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 HSPE1P3-201ENST00000559254 309 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 TTC39CP1-201ENST00000512513 755 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AP000553.5-201ENST00000641933 54 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AC011477.1-204ENST00000623416 1325 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AC092447.7-201ENST00000422212 1621 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 RNA5SP502-201ENST00000362694 119 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 U8.9-201ENST00000365667 134 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 BX510359.4-201ENST00000423750 193 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 RNA5SP385-201ENST00000515947 110 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 RNY4P27-201ENST00000363341 96 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 MTCO1P3-201ENST00000429327 192 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 RSL24D1P11-201ENST00000591045 491 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AL137847.3-201ENST00000611521 109 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR4Q5T4S7 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AL353689.1-201ENST00000438895 199 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC090255.1-201ENST00000495779 349 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 SNORA51.4-201ENST00000364993 124 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC096649.2-201ENST00000416186 393 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 SNORD57-201ENST00000448188 72 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC109471.1-201ENST00000511631 612 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 RNY4-201ENST00000516507 96 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC060766.3-201ENST00000591442 263 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 RPS20P10-201ENST00000451209 253 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC078918.1-201ENST00000498515 228 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC096751.1-202ENST00000502691 1067 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 SNORA3.4-201ENST00000515969 96 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC139103.1-201ENST00000534696 1030 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.81□□□□□ -2.28
UBR4Q5T4S7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 VN1R107P-201ENST00000601784 209 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 MIR502-201ENST00000606349 86 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AP000776.1-201ENST00000530032 1663 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AC103833.1-201ENST00000517442 172 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 ELL2P3-201ENST00000457883 1602 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 RNA5SP160-201ENST00000364866 120 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 FABP5P6-201ENST00000510588 409 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 MTCO3P13-201ENST00000577757 781 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AC145207.9-201ENST00000623802 325 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 RNU6-1104P-201ENST00000384723 104 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 RN7SKP142-201ENST00000411236 328 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.8□□□□□ -2.28
UBR4Q5T4S7 RPL37P6-202ENST00000464216 403 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AC023043.3-201ENST00000593113 385 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 AC245060.5-201ENST00000610778 3293 ntBASIC0.8□□□□□ -2.28
UBR4Q5T4S7 DYNLT3P1-201ENST00000378574 347 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AF274854.1-201ENST00000413236 615 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 HIGD1AP11-201ENST00000438361 280 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 CR769776.1-201ENST00000441254 787 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 RPL23AP7-203ENST00000449021 469 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC006329.2-201ENST00000611491 394 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC090453.1-201ENST00000495560 436 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms