Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 RNU6-306P-201ENST00000384617 107 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 TOMM22P1-201ENST00000418578 312 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 COX6CP13-201ENST00000428703 226 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC236972.1-201ENST00000433225 199 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 RPL5P30-201ENST00000465511 891 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AP000926.1-201ENST00000479573 241 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 RN7SL459P-201ENST00000481078 302 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 RPS15AP34-201ENST00000487776 387 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC021146.2-201ENST00000504736 556 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC092436.3-201ENST00000511788 257 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC108043.1-201ENST00000512696 574 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC009902.1-201ENST00000519351 183 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AP001880.2-201ENST00000538233 448 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC091042.1-201ENST00000579213 173 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC011890.2-201ENST00000613393 294 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC083806.3-201ENST00000614016 455 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC131238.1-201ENST00000617135 328 ntBASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SNAP47Q5SQN1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 U3.15-201ENST00000365398 212 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 Y_RNA.463-201ENST00000384271 102 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 MIR192-201ENST00000384915 110 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 RPS16P5-201ENST00000406501 404 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 RNU6-293P-201ENST00000411259 106 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 Z99755.1-201ENST00000414048 380 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 MCFD2P1-201ENST00000417812 300 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 AC104333.2-201ENST00000422630 192 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 UBE2V1P4-201ENST00000425374 344 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 MTND5P30-201ENST00000452896 1731 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 SNORD5.1-201ENST00000458800 75 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 AC103987.1-201ENST00000473394 348 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 RNU6-1315P-201ENST00000517187 99 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 NDUFB4P11-201ENST00000560510 395 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 AC098826.3-201ENST00000603823 466 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 AC005344.1-201ENST00000613391 459 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SNAP47Q5SQN1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RNU6-512P-201ENST00000364438 103 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 Y_RNA.252-201ENST00000364556 101 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RNA5SP505-201ENST00000364748 108 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RNU6-398P-201ENST00000384143 109 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AL356057.3-201ENST00000402607 340 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RNA5SP113-201ENST00000410486 84 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RNU6-607P-201ENST00000411283 108 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC007738.1-201ENST00000413892 348 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC091390.3-201ENST00000426478 338 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AL645568.3-201ENST00000433683 316 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC009220.1-201ENST00000451614 275 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RPS24P6-201ENST00000452670 400 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RN7SKP276-201ENST00000516242 268 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 RNU6-1137P-201ENST00000517073 99 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 IGKV2D-23-201ENST00000518179 286 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC027369.5-201ENST00000533838 755 ntBASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.75□□□□□ -1.65
SNAP47Q5SQN1 TVP23CP2-201ENST00000571473 623 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms