Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC060780.3-201ENST00000589464 80 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AL022099.1-201ENST00000604551 712 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC128687.2-201ENST00000609657 566 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC015967.1-201ENST00000619893 476 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC093648.1-201ENST00000623546 606 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 MIR3662-201ENST00000637030 95 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 MTND4P23-201ENST00000447723 1363 ntBASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A4Q53GD3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RNU6-1085P-201ENST00000363576 107 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RNU6-877P-201ENST00000383868 107 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 MIR491-201ENST00000384877 84 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RNU6-882P-201ENST00000391025 103 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RNU6-754P-201ENST00000391166 107 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RNU4-65P-201ENST00000410473 140 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RPS23P10-201ENST00000416185 486 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 HMGB3P20-201ENST00000417997 600 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC099677.1-201ENST00000420575 175 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC006480.1-201ENST00000449887 378 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 PPIAP15-201ENST00000479662 484 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 Y_RNA.693-201ENST00000516641 110 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 SCARNA13-201ENST00000516672 275 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 NARSP2-201ENST00000518524 679 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC018630.1-201ENST00000541376 925 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC063950.1-201ENST00000552036 308 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 MIR4293-201ENST00000584305 78 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 GLUD1P4-201ENST00000590914 418 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC010133.1-201ENST00000615809 842 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC010338.1-201ENST00000621823 717 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 AC090337.1-201ENST00000579651 2074 ntBASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A4Q53GD3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MTND5P17-201ENST00000418405 1603 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 SNORD56.2-201ENST00000363242 71 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MIR1-2-201ENST00000384961 85 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RPL21P17-201ENST00000397467 475 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AL109755.1-201ENST00000401791 649 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AL356776.1-201ENST00000406574 447 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RNU2-9P-201ENST00000410194 145 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RNU2-36P-201ENST00000410361 191 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RNU2-62P-201ENST00000410868 191 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC090774.1-201ENST00000435925 246 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RPL35AP22-201ENST00000436855 335 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC023598.1-201ENST00000472521 361 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC093278.1-201ENST00000494700 600 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 HMGB1P22-201ENST00000505315 124 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MTND3P22-201ENST00000510932 243 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 SNORA70.24-201ENST00000517233 118 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RNA5SP179-201ENST00000517284 121 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 PHBP17-201ENST00000528576 541 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 RPL23AP87-202ENST00000573039 466 ntBASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC44A4Q53GD3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms