Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
RFX4Q33E94 AC090186.1-201ENST00000605991 572 ntBASIC2.45□□□□□ -2.02
RFX4Q33E94 AL161734.1-201ENST00000609720 557 ntBASIC2.45□□□□□ -2.02
RFX4Q33E94 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX4Q33E94 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.45□□□□□ -2.02
RFX4Q33E94 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX4Q33E94 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
RFX4Q33E94 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RFX4Q33E94 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX4Q33E94 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX4Q33E94 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RFX4Q33E94 ZNF519P1-201ENST00000449011 1626 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 FAM133CP-201ENST00000332869 704 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 RNU6-359P-201ENST00000365466 108 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RFX4Q33E94 RNU6-76P-201ENST00000384060 104 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 RNU2-25P-201ENST00000411041 191 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 RPLP0P7-201ENST00000416050 667 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX4Q33E94 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC129850.1-201ENST00000436203 508 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 Z80107.1-201ENST00000436830 412 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 RSL24D1P3-201ENST00000449255 495 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC010099.1-201ENST00000455434 375 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX4Q33E94 RPS29P26-201ENST00000477483 171 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 RPL31P60-201ENST00000478450 367 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC147055.4-201ENST00000504399 745 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC024589.1-201ENST00000512207 263 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 RN7SKP40-201ENST00000517211 242 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 MRPS36P3-201ENST00000519284 130 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC100870.1-201ENST00000522035 505 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 MTCO1P47-201ENST00000523889 1271 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC022080.3-201ENST00000544433 482 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC061975.8-201ENST00000587058 721 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AL158211.4-201ENST00000606988 584 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC104237.2-201ENST00000612456 443 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 AC011330.2-201ENST00000621680 635 ntBASIC2.44□□□□□ -2.02
RFX4Q33E94 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RFX4Q33E94 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX4Q33E94 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX4Q33E94 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX4Q33E94 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RFX4Q33E94 AL161781.1-201ENST00000354277 403 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 RNU6-433P-201ENST00000363216 104 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 RNU5E-8P-201ENST00000363502 116 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 MIR627-201ENST00000384979 97 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RFX4Q33E94 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AL356421.1-201ENST00000403255 413 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFX4Q33E94 PPP1R11P2-201ENST00000423543 382 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX4Q33E94 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AL139132.1-201ENST00000431587 344 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 NDUFB4P6-201ENST00000436819 366 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 RSU1P2-202ENST00000437884 485 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 SNORD11.1-201ENST00000459482 85 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 MTCYBP43-201ENST00000513621 740 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 RNU5A-4P-201ENST00000516588 111 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AC105185.1-201ENST00000518705 535 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.43□□□□□ -2.02
RFX4Q33E94 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AC087465.1-201ENST00000560574 245 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX4Q33E94 UBE2L4-201ENST00000587688 464 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX4Q33E94 VN1R82P-201ENST00000601481 356 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AC011451.2-201ENST00000604303 598 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AP000240.1-201ENST00000609910 452 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AP000254.1-201ENST00000609934 520 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms