Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 USP9YP10-201ENST00000454868 628 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC097493.1-201ENST00000463958 372 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC104689.1-201ENST00000473356 768 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX7Q2KHR2 NDUFB4P2-201ENST00000509515 391 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC023824.2-201ENST00000566185 400 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC005332.10-201ENST00000612725 619 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC091932.3-201ENST00000624223 323 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 AC097372.4-201ENST00000625025 466 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 CCT4P2-201ENST00000233836 1548 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 CR848007.1-201ENST00000442354 1699 ntBASIC1.99□□□□□ -2.09
RFX7Q2KHR2 Y_RNA.40-201ENST00000362645 93 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 SNORD23.1-201ENST00000408212 104 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RNU2-17P-201ENST00000410290 190 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RN7SKP101-201ENST00000411376 320 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 SSXP1-201ENST00000453640 473 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 HMGN1P8-201ENST00000463578 288 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RPS29P20-201ENST00000489592 171 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RN7SKP96-201ENST00000516948 297 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC118942.1-201ENST00000529674 1035 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RPS3AP4-201ENST00000555161 764 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL353748.2-201ENST00000622148 471 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 SNORA68.1-201ENST00000364537 132 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 MIR489-201ENST00000384923 84 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 MT-TC-201ENST00000387405 66 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RNU4-74P-201ENST00000411280 161 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 HMGB1P27-201ENST00000431429 603 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 HMGB1P31-201ENST00000437242 427 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 ARF4P4-201ENST00000439608 520 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL645638.1-201ENST00000440519 361 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 RNU7-26P-201ENST00000458980 63 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 KATNBL1P4-201ENST00000503545 918 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC022634.1-201ENST00000520765 532 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC084851.1-201ENST00000529105 249 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 SUB1P3-201ENST00000564581 315 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX7Q2KHR2 MIR3609-201ENST00000582661 80 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 BNIP3P7-201ENST00000605641 516 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 MIR502-201ENST00000606349 86 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC135803.1-201ENST00000608748 565 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 HMGB1P24-202ENST00000615653 685 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL162373.1-201ENST00000620433 407 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AL158801.5-201ENST00000623123 465 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 AC098679.5-201ENST00000624394 571 ntBASIC1.98□□□□□ -2.09
RFX7Q2KHR2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 SNORA46.1-201ENST00000391069 153 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AL357078.2-201ENST00000416486 427 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 OFD1P18Y-201ENST00000420889 959 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC010099.1-201ENST00000455434 375 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC069528.1-202ENST00000482888 637 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC109471.1-201ENST00000511631 612 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC023158.1-201ENST00000561632 1025 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC087481.2-201ENST00000565492 330 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC013444.2-201ENST00000603317 787 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AL645939.4-201ENST00000604495 135 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 BX248123.2-201ENST00000606318 124 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 AC025594.3-201ENST00000613068 790 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.97□□□□□ -2.09
RFX7Q2KHR2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AL022578.1-201ENST00000439330 1433 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 RNU6-1243P-201ENST00000364028 107 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 RNA5SP56-201ENST00000410277 118 ntBASIC1.96□□□□□ -2.1
RFX7Q2KHR2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms