Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-955P-201ENST00000410497 104 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 MTCO3P46-201ENST00000425787 232 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 UBE2V1P5-201ENST00000440070 405 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.08□□□□□ -2.24
TFF3Q07654 MTND1P18-201ENST00000448191 573 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TFF3Q07654 AL359273.1-201ENST00000510918 627 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.08□□□□□ -2.24
TFF3Q07654 AP005597.4-201ENST00000526762 229 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AC016957.1-201ENST00000534895 309 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AC024619.4-201ENST00000580924 316 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.08□□□□□ -2.24
TFF3Q07654 AC245036.5-201ENST00000596330 847 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
TFF3Q07654 AC004908.2-201ENST00000609090 574 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AC006338.1-201ENST00000618453 749 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.08□□□□□ -2.24
TFF3Q07654 LINC00216-201ENST00000623548 1126 ntBASIC1.08□□□□□ -2.24
TFF3Q07654 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.08□□□□□ -2.24
TFF3Q07654 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TFF3Q07654 ZNF519P1-201ENST00000449011 1626 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TFF3Q07654 CR382285.2-201ENST00000624662 1495 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 MIR7-2-201ENST00000384970 110 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.07□□□□□ -2.24
TFF3Q07654 AL121769.1-201ENST00000469473 401 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 AL135752.1-201ENST00000479477 471 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TFF3Q07654 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TFF3Q07654 AL137100.2-201ENST00000555786 315 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.07□□□□□ -2.24
TFF3Q07654 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.07□□□□□ -2.24
TFF3Q07654 SDR42E1P2-201ENST00000614861 481 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 AC022079.2-201ENST00000619739 566 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 SDR42E1P4-201ENST00000620894 481 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 AC011330.2-201ENST00000621680 635 ntBASIC1.07□□□□□ -2.24
TFF3Q07654 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TFF3Q07654 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.07□□□□□ -2.24
TFF3Q07654 AC009902.3-201ENST00000606235 2172 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 AL033519.2-201ENST00000403958 392 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.06□□□□□ -2.24
TFF3Q07654 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.06□□□□□ -2.24
TFF3Q07654 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.06□□□□□ -2.24
TFF3Q07654 HSPE1P24-201ENST00000450782 238 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.06□□□□□ -2.24
TFF3Q07654 AC026801.1-201ENST00000497178 464 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 AC093801.2-201ENST00000503966 1050 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 AC092436.3-201ENST00000511788 257 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 Y_RNA.670-201ENST00000516255 105 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 RNU6-347P-201ENST00000516658 105 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 AP000907.2-201ENST00000530827 353 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 FAM106DP-201ENST00000586416 501 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.06□□□□□ -2.24
TFF3Q07654 AL627230.6-201ENST00000611129 280 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
TFF3Q07654 AC021755.4-201ENST00000616620 456 ntBASIC1.06□□□□□ -2.24
TFF3Q07654 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TFF3Q07654 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AL133384.1-201ENST00000412744 351 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 SRIP3-201ENST00000413200 219 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AC022022.1-201ENST00000430304 178 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AL121601.2-201ENST00000438019 707 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AL357134.1-201ENST00000445848 426 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 RNU6-1218P-201ENST00000458990 108 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 snoU13.3-201ENST00000459441 104 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 RNU7-157P-201ENST00000459600 66 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 RPS29P1-201ENST00000465274 159 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AC055855.1-201ENST00000489563 579 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 OR5H4P-201ENST00000510851 923 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 MRPS17P9-201ENST00000511924 393 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.05□□□□□ -2.24
TFF3Q07654 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TFF3Q07654 PSMA3P-201ENST00000555485 635 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.05□□□□□ -2.24
TFF3Q07654 MIR4658-201ENST00000584344 65 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 RN7SL622P-201ENST00000585292 275 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 AC109809.1-201ENST00000619665 545 ntBASIC1.05□□□□□ -2.24
TFF3Q07654 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
TFF3Q07654 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TFF3Q07654 RNU6-582P-201ENST00000362989 107 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 RNA5SP139-201ENST00000364340 117 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 SNORA16B-201ENST00000364674 135 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 RNU4-91P-201ENST00000364778 135 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TFF3Q07654 MIR676-201ENST00000390702 67 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AL591034.1-201ENST00000407447 340 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 SNORD23.1-201ENST00000408212 104 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.04□□□□□ -2.24
TFF3Q07654 AC015922.2-201ENST00000435593 184 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AP000949.1-201ENST00000438328 629 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.04□□□□□ -2.24
TFF3Q07654 AC107398.1-201ENST00000486904 505 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms