Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ELF2P3-201ENST00000445099 1506 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 RNU6-253P-201ENST00000384730 105 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SSBP1Q04837 GSTA9P-201ENST00000406231 611 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 RNA5SP80-201ENST00000410475 111 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 Z92545.1-201ENST00000411782 234 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC092745.2-202ENST00000411880 369 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 USP9YP6-201ENST00000413550 854 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 TATDN1P1-201ENST00000414123 891 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 FCF1P2-201ENST00000415284 583 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SSBP1Q04837 AL035410.1-201ENST00000427409 427 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC090774.1-201ENST00000435925 246 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AP000949.1-201ENST00000438328 629 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 RPL7P36-201ENST00000444633 681 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.22□□□□□ -2.21
SSBP1Q04837 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 RNU7-23P-201ENST00000459465 62 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC072039.1-201ENST00000477611 581 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 RPL31P60-201ENST00000478450 367 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC093801.2-201ENST00000503966 1050 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.22□□□□□ -2.21
SSBP1Q04837 SCARNA17.1-201ENST00000516211 143 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 SCARNA17.2-201ENST00000516334 143 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.22□□□□□ -2.21
SSBP1Q04837 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.22□□□□□ -2.21
SSBP1Q04837 AC005498.1-201ENST00000592125 465 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.22□□□□□ -2.21
SSBP1Q04837 AL355877.2-201ENST00000603670 358 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC138473.1-201ENST00000605717 526 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC126118.1-201ENST00000607744 628 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC093673.2-201ENST00000609674 331 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AC103710.2-201ENST00000609912 942 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 AP000254.1-201ENST00000609934 520 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 SCARNA17.4-201ENST00000614296 143 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 TPTE2P4-201ENST00000258589 1605 ntBASIC1.22□□□□□ -2.21
SSBP1Q04837 MTND4P23-201ENST00000447723 1363 ntBASIC1.21□□□□□ -2.21
SSBP1Q04837 AC080128.1-201ENST00000474389 1917 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.21□□□□□ -2.22
SSBP1Q04837 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SSBP1Q04837 RNU6-173P-201ENST00000364215 104 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SSBP1Q04837 SNORA40.18-201ENST00000391200 128 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AC012497.1-201ENST00000429392 575 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AC236972.1-201ENST00000433225 199 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 RAB11AP1-201ENST00000442978 646 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AL357134.1-201ENST00000445848 426 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC104073.1-201ENST00000451988 151 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 SSXP1-201ENST00000453640 473 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 CDC42P1-201ENST00000456658 548 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 MTND4LP3-201ENST00000468320 276 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 RPL23AP42-201ENST00000471152 471 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC068781.1-201ENST00000488231 618 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC026801.1-201ENST00000497178 464 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AC008549.1-201ENST00000512900 643 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 RNU6-970P-201ENST00000516312 107 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 RNU6-798P-201ENST00000516912 103 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 SNORA31.25-201ENST00000517242 134 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 RANP3-201ENST00000530970 276 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.21□□□□□ -2.22
SSBP1Q04837 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AC012443.1-201ENST00000605605 231 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AL392048.1-201ENST00000613946 534 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC003001.2-201ENST00000616294 831 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC018926.3-201ENST00000618841 406 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AC011330.2-201ENST00000621680 635 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 MIR7843-201ENST00000622274 79 ntBASIC1.21□□□□□ -2.22
SSBP1Q04837 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.21□□□□□ -2.22
SSBP1Q04837 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.21□□□□□ -2.22
SSBP1Q04837 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SSBP1Q04837 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SSBP1Q04837 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SSBP1Q04837 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SSBP1Q04837 RNU4-82P-201ENST00000362443 140 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 RNU4-23P-201ENST00000362839 140 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SSBP1Q04837 LINC01347-201ENST00000417964 355 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 AL109913.1-201ENST00000421173 514 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 RPS3AP44-201ENST00000425466 790 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.2□□□□□ -2.22
SSBP1Q04837 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.2□□□□□ -2.22
SSBP1Q04837 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.2□□□□□ -2.22
SSBP1Q04837 Z80107.1-201ENST00000436830 412 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.2□□□□□ -2.22
SSBP1Q04837 Z82190.1-201ENST00000454534 490 ntBASIC1.2□□□□□ -2.22
SSBP1Q04837 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.2□□□□□ -2.22
SSBP1Q04837 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.2□□□□□ -2.22
SSBP1Q04837 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms