Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
NKX6-1P78426 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX6-1P78426 AC011266.1-201ENST00000624119 3569 ntBASIC3.9□□□□□ -1.78
NKX6-1P78426 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX6-1P78426 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX6-1P78426 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX6-1P78426 RPL23AP26-201ENST00000412728 464 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 VDAC1P9-201ENST00000412766 841 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 BTF3L4P3-201ENST00000418879 476 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.9□□□□□ -1.79
NKX6-1P78426 KCTD9P3-201ENST00000434597 1169 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX6-1P78426 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX6-1P78426 RNU7-180P-201ENST00000459240 63 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 UQCRHP4-201ENST00000471686 272 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX6-1P78426 AC008628.2-201ENST00000502605 298 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.9□□□□□ -1.79
NKX6-1P78426 AC010486.1-201ENST00000511793 424 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX6-1P78426 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX6-1P78426 RNU6-143P-201ENST00000516942 93 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 RNA5SP291-201ENST00000517222 105 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX6-1P78426 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX6-1P78426 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX6-1P78426 AC025884.1-201ENST00000556034 378 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC106782.4-201ENST00000568264 210 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC106900.2-201ENST00000604994 317 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX6-1P78426 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX6-1P78426 AL390240.1-201ENST00000612950 384 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 AC093913.1-201ENST00000614178 329 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.9□□□□□ -1.79
NKX6-1P78426 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX6-1P78426 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX6-1P78426 AC068254.2-201ENST00000623938 3577 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NKX6-1P78426 MARK2P15-201ENST00000432204 2186 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 CISD1P1-201ENST00000393907 327 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 MIR921-201ENST00000401133 56 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 RNU4-26P-201ENST00000410270 107 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 EEF1A1P40-201ENST00000412883 573 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AC092809.3-201ENST00000415453 231 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 Z74021.1-201ENST00000423610 407 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 AL591704.1-201ENST00000432574 275 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.89□□□□□ -1.79
NKX6-1P78426 PMCHL2-203ENST00000457791 237 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 RPS20P22-201ENST00000473700 357 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX6-1P78426 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 RPS15AP34-201ENST00000487776 387 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 RNA5SP497-201ENST00000516081 97 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 IGKV2D-19-201ENST00000523346 262 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 OR8R1P-201ENST00000543943 764 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.89□□□□□ -1.79
NKX6-1P78426 UBE2V2P2-201ENST00000587677 504 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX6-1P78426 BPIFA4P-203ENST00000603168 689 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 RNU6-89P-201ENST00000606519 100 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX6-1P78426 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NKX6-1P78426 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 EOGT-210ENST00000615922 1931 ntBASIC3.89□□□□□ -1.79
NKX6-1P78426 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX6-1P78426 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX6-1P78426 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX6-1P78426 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX6-1P78426 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX6-1P78426 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NKX6-1P78426 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
NKX6-1P78426 UBE2L2-201ENST00000254302 429 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 CBX3P1-201ENST00000325243 554 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 RNA5SP52-201ENST00000362448 134 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NKX6-1P78426 DEFB109C-201ENST00000382575 264 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 DEFB109B-201ENST00000382656 264 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 RNU6-38P-201ENST00000384085 107 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 UBE2V1P2-201ENST00000397758 440 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms