Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CX3CL1P78423 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 Y_RNA.296-201ENST00000364930 108 ntBASIC3□□□□□ -1.93
CX3CL1P78423 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3□□□□□ -1.93
CX3CL1P78423 MIR30B-201ENST00000384850 88 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
CX3CL1P78423 MED13P1-201ENST00000428342 171 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AL590383.1-201ENST00000428602 75 ntBASIC3□□□□□ -1.93
CX3CL1P78423 RPL23AP30-201ENST00000432419 501 ntBASIC3□□□□□ -1.93
CX3CL1P78423 GPR143P-201ENST00000434155 205 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 RPS29P7-201ENST00000439662 171 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AC009237.8-201ENST00000445492 379 ntBASIC3□□□□□ -1.93
CX3CL1P78423 CBWD4P-201ENST00000445695 655 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3□□□□□ -1.93
CX3CL1P78423 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3□□□□□ -1.93
CX3CL1P78423 RNA5SP310-201ENST00000459084 116 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AC026784.1-201ENST00000507986 352 ntBASIC3□□□□□ -1.93
CX3CL1P78423 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3□□□□□ -1.93
CX3CL1P78423 RNA5SP208-201ENST00000516156 78 ntBASIC3□□□□□ -1.93
CX3CL1P78423 RNU6-720P-201ENST00000516363 108 ntBASIC3□□□□□ -1.93
CX3CL1P78423 RNU6-352P-201ENST00000516908 107 ntBASIC3□□□□□ -1.93
CX3CL1P78423 RN7SKP60-201ENST00000516985 239 ntBASIC3□□□□□ -1.93
CX3CL1P78423 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CX3CL1P78423 AC245505.1-201ENST00000556398 224 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3□□□□□ -1.93
CX3CL1P78423 RN7SL703P-201ENST00000578485 302 ntBASIC3□□□□□ -1.93
CX3CL1P78423 MIR5047-201ENST00000579212 100 ntBASIC3□□□□□ -1.93
CX3CL1P78423 MIR4425-201ENST00000580572 84 ntBASIC3□□□□□ -1.93
CX3CL1P78423 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3□□□□□ -1.93
CX3CL1P78423 AC093227.2-201ENST00000589357 285 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AC012557.2-201ENST00000605919 418 ntBASIC3□□□□□ -1.93
CX3CL1P78423 SNORA62.6-201ENST00000606322 83 ntBASIC3□□□□□ -1.93
CX3CL1P78423 AC009570.1-201ENST00000609599 745 ntBASIC3□□□□□ -1.93
CX3CL1P78423 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3□□□□□ -1.93
CX3CL1P78423 AC005344.1-201ENST00000613391 459 ntBASIC3□□□□□ -1.93
CX3CL1P78423 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 AL359740.1-201ENST00000624340 592 ntBASIC3□□□□□ -1.93
CX3CL1P78423 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 AP004289.2-201ENST00000444413 1457 ntBASIC3□□□□□ -1.93
CX3CL1P78423 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3□□□□□ -1.93
CX3CL1P78423 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3□□□□□ -1.93
CX3CL1P78423 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CL1P78423 RIOK3P1-201ENST00000418778 1528 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CL1P78423 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CX3CL1P78423 RNU6-960P-201ENST00000364056 120 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 RNU6-741P-201ENST00000383889 107 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 GSTA9P-201ENST00000406231 611 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AL591419.1-201ENST00000427423 339 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC092573.2-201ENST00000434546 243 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AL451074.3-201ENST00000437709 472 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CL1P78423 SSXP4-201ENST00000451349 245 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AC023598.1-201ENST00000472521 361 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 RPS20P22-201ENST00000473700 357 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 RPL30P5-201ENST00000494923 336 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CL1P78423 SNORA31.3-201ENST00000516029 96 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 RNU6-927P-201ENST00000516199 100 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 RN7SKP209-201ENST00000516888 304 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 SCARNA14-201ENST00000516903 136 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 RNU6-410P-201ENST00000517006 107 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC022690.1-201ENST00000526681 550 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 SUB1P2-201ENST00000556401 297 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC006960.3-201ENST00000561845 705 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AC010546.1-201ENST00000569391 485 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 MIR5685-201ENST00000579080 79 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AL121992.2-201ENST00000606262 256 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 AL731566.2-201ENST00000618971 317 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.99□□□□□ -1.93
CX3CL1P78423 OR5AK4P-201ENST00000635912 903 ntBASIC2.99□□□□□ -1.93
CX3CL1P78423 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CL1P78423 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.99□□□□□ -1.93
CX3CL1P78423 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CL1P78423 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CL1P78423 MTND5P29-201ENST00000458676 1807 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 AC073343.1-201ENST00000328239 651 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 Y_RNA.3-201ENST00000362331 103 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 RNA5SP479-201ENST00000364858 117 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms