Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 uc_338.11-201ENST00000619132 160 ntBASIC3.66□□□□□ -1.82
RAE1P78406 MIR6500-201ENST00000622700 86 ntBASIC3.66□□□□□ -1.82
RAE1P78406 AC025034.2-201ENST00000623264 286 ntBASIC3.66□□□□□ -1.82
RAE1P78406 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.66□□□□□ -1.82
RAE1P78406 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RAE1P78406 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RAE1P78406 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RAE1P78406 FAM35DP-201ENST00000323387 2712 ntBASIC3.65□□□□□ -1.82
RAE1P78406 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RAE1P78406 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.65□□□□□ -1.82
RAE1P78406 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
RAE1P78406 SDAD1P2-201ENST00000441308 2028 ntBASIC3.65□□□□□ -1.82
RAE1P78406 AC092326.2-201ENST00000624772 1561 ntBASIC3.65□□□□□ -1.82
RAE1P78406 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
RAE1P78406 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RAE1P78406 SNORA7.2-201ENST00000364446 145 ntBASIC3.65□□□□□ -1.83
RAE1P78406 RNU6-61P-201ENST00000365528 109 ntBASIC3.65□□□□□ -1.83
RAE1P78406 SMIM11P1-201ENST00000369586 178 ntBASIC3.65□□□□□ -1.83
RAE1P78406 RNU6-1029P-201ENST00000384109 107 ntBASIC3.65□□□□□ -1.83
RAE1P78406 SNORA24.1-201ENST00000384401 135 ntBASIC3.65□□□□□ -1.83
RAE1P78406 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RAE1P78406 NDUFS5P1-201ENST00000405668 289 ntBASIC3.65□□□□□ -1.83
RAE1P78406 MTCYBP8-201ENST00000422855 651 ntBASIC3.65□□□□□ -1.83
RAE1P78406 DUTP6-201ENST00000425573 462 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC093106.2-201ENST00000428212 385 ntBASIC3.65□□□□□ -1.83
RAE1P78406 RPL36AP53-201ENST00000432891 316 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.65□□□□□ -1.83
RAE1P78406 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.65□□□□□ -1.83
RAE1P78406 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.65□□□□□ -1.83
RAE1P78406 AL671855.1-201ENST00000446875 1203 ntBASIC3.65□□□□□ -1.83
RAE1P78406 MTND1P18-201ENST00000448191 573 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.65□□□□□ -1.83
RAE1P78406 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.65□□□□□ -1.83
RAE1P78406 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
RAE1P78406 HMGB3P30-201ENST00000457863 606 ntBASIC3.65□□□□□ -1.83
RAE1P78406 snoU13.24-201ENST00000458998 104 ntBASIC3.65□□□□□ -1.83
RAE1P78406 RPL7L1P8-201ENST00000469911 741 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC078918.1-201ENST00000498515 228 ntBASIC3.65□□□□□ -1.83
RAE1P78406 VN1R104P-201ENST00000505115 1009 ntBASIC3.65□□□□□ -1.83
RAE1P78406 MLLT10P2-201ENST00000506434 249 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.65□□□□□ -1.83
RAE1P78406 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.65□□□□□ -1.83
RAE1P78406 RNU6-390P-201ENST00000516259 103 ntBASIC3.65□□□□□ -1.83
RAE1P78406 RN7SKP219-201ENST00000516825 296 ntBASIC3.65□□□□□ -1.83
RAE1P78406 RNU6-352P-201ENST00000516908 107 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.65□□□□□ -1.83
RAE1P78406 SUMO2P20-201ENST00000520803 283 ntBASIC3.65□□□□□ -1.83
RAE1P78406 SUB1P1-201ENST00000524415 382 ntBASIC3.65□□□□□ -1.83
RAE1P78406 CENPUP1-201ENST00000526649 1202 ntBASIC3.65□□□□□ -1.83
RAE1P78406 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.65□□□□□ -1.83
RAE1P78406 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RAE1P78406 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RAE1P78406 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.65□□□□□ -1.83
RAE1P78406 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.65□□□□□ -1.83
RAE1P78406 MIR4703-201ENST00000577728 79 ntBASIC3.65□□□□□ -1.83
RAE1P78406 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.65□□□□□ -1.83
RAE1P78406 AP001029.3-201ENST00000588063 596 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.65□□□□□ -1.83
RAE1P78406 BNIP3P9-201ENST00000603714 553 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AL137849.1-201ENST00000604767 169 ntBASIC3.65□□□□□ -1.83
RAE1P78406 BNIP3P10-201ENST00000605360 577 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC008945.2-201ENST00000606056 604 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AC010133.1-201ENST00000615809 842 ntBASIC3.65□□□□□ -1.83
RAE1P78406 AL589994.2-201ENST00000621124 579 ntBASIC3.65□□□□□ -1.83
RAE1P78406 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.65□□□□□ -1.83
RAE1P78406 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RAE1P78406 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RAE1P78406 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RAE1P78406 AC018529.3-201ENST00000624212 2254 ntBASIC3.65□□□□□ -1.83
RAE1P78406 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RAE1P78406 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RAE1P78406 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.64□□□□□ -1.83
RAE1P78406 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RAE1P78406 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RAE1P78406 AL157700.1-201ENST00000561973 1432 ntBASIC3.64□□□□□ -1.83
RAE1P78406 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.64□□□□□ -1.83
RAE1P78406 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.64□□□□□ -1.83
RAE1P78406 XIAPP3-201ENST00000312918 795 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RNU1-18P-201ENST00000363062 164 ntBASIC3.64□□□□□ -1.83
RAE1P78406 Y_RNA.279-201ENST00000364763 95 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RNU6-213P-201ENST00000384051 104 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RNU6-1181P-201ENST00000384191 106 ntBASIC3.64□□□□□ -1.83
RAE1P78406 SNORA36C-201ENST00000384289 132 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RNU6-193P-201ENST00000410977 107 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RNU6-387P-201ENST00000411331 105 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.64□□□□□ -1.83
RAE1P78406 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.64□□□□□ -1.83
RAE1P78406 RPL21P109-201ENST00000422213 475 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AL117339.2-201ENST00000430475 180 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.64□□□□□ -1.83
RAE1P78406 H2AFZP6-201ENST00000444403 394 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AC020550.1-201ENST00000447385 163 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AL162151.2-201ENST00000448875 158 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RPS20P20-201ENST00000460498 340 ntBASIC3.64□□□□□ -1.83
RAE1P78406 RPL39P36-201ENST00000490784 156 ntBASIC3.64□□□□□ -1.83
RAE1P78406 EIF4EP3-201ENST00000498782 656 ntBASIC3.64□□□□□ -1.83
RAE1P78406 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.64□□□□□ -1.83
RAE1P78406 AC092436.1-201ENST00000506450 503 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms