Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 AC008526.1-201ENST00000509149 338 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CKS1BP61024 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 AP001646.1-201ENST00000527936 915 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CKS1BP61024 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.44□□□□□ -2.18
CKS1BP61024 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.44□□□□□ -2.18
CKS1BP61024 AC007938.3-201ENST00000604965 623 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AC026790.2-201ENST00000606282 430 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AC069294.1-201ENST00000608397 350 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AP002791.1-201ENST00000623291 381 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AP001002.2-201ENST00000625137 386 ntBASIC1.44□□□□□ -2.18
CKS1BP61024 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.44□□□□□ -2.18
CKS1BP61024 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.44□□□□□ -2.18
CKS1BP61024 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CKS1BP61024 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CKS1BP61024 RNU6-1339P-201ENST00000363574 91 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.43□□□□□ -2.18
CKS1BP61024 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CKS1BP61024 ATF1P1-201ENST00000406040 927 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 SNORA11.4-201ENST00000408823 129 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 AC096649.2-201ENST00000416186 393 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.43□□□□□ -2.18
CKS1BP61024 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.43□□□□□ -2.18
CKS1BP61024 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.43□□□□□ -2.18
CKS1BP61024 RPS15AP5-201ENST00000436276 388 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.43□□□□□ -2.18
CKS1BP61024 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.43□□□□□ -2.18
CKS1BP61024 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.43□□□□□ -2.18
CKS1BP61024 PPP1R2P5-201ENST00000457256 603 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 MRPS17P3-201ENST00000465453 385 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 AC140059.1-201ENST00000489238 361 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 AC234778.2-201ENST00000566241 354 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 MIR4285-201ENST00000581001 85 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.43□□□□□ -2.18
CKS1BP61024 MIR6873-201ENST00000622788 63 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 AP003485.2-201ENST00000623636 610 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CKS1BP61024 WWP1P1-201ENST00000466609 2769 ntBASIC1.43□□□□□ -2.18
CKS1BP61024 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CKS1BP61024 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
CKS1BP61024 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CKS1BP61024 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.42□□□□□ -2.18
CKS1BP61024 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CKS1BP61024 U8.3-201ENST00000363321 132 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC016769.3-201ENST00000396562 315 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 OR4K6P-201ENST00000416478 897 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.42□□□□□ -2.18
CKS1BP61024 AC244636.1-201ENST00000421152 228 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.42□□□□□ -2.18
CKS1BP61024 RPS3AP44-201ENST00000425466 790 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 HIGD1AP2-201ENST00000446367 280 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AL109933.2-201ENST00000452651 260 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 RPL12P25-201ENST00000455592 494 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 BZW1P2-201ENST00000473537 826 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 SETP6-201ENST00000479329 568 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC093767.1-201ENST00000504523 156 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.42□□□□□ -2.18
CKS1BP61024 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.42□□□□□ -2.18
CKS1BP61024 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.42□□□□□ -2.18
CKS1BP61024 RNA5SP281-201ENST00000516504 135 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.42□□□□□ -2.18
CKS1BP61024 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.42□□□□□ -2.18
CKS1BP61024 AP002748.2-201ENST00000528671 348 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CKS1BP61024 AC004217.3-201ENST00000551552 878 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 MTCYBP23-201ENST00000558717 1102 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC027104.1-201ENST00000563702 681 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 MIR3126-201ENST00000577443 74 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AL022067.1-201ENST00000602426 454 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC080013.4-201ENST00000607624 649 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 MIR6798-201ENST00000612887 67 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC104763.3-201ENST00000613765 618 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AL590099.1-201ENST00000615276 138 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC006213.4-201ENST00000616184 634 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC011330.2-201ENST00000621680 635 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC093591.3-201ENST00000634516 308 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC116618.1-201ENST00000634617 774 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.42□□□□□ -2.18
CKS1BP61024 MKKS-204ENST00000639674 192 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 AC007785.2-201ENST00000598627 1916 ntBASIC1.42□□□□□ -2.18
CKS1BP61024 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
CKS1BP61024 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CKS1BP61024 MIR218-1-201ENST00000384999 110 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.41□□□□□ -2.18
CKS1BP61024 VN1R36P-201ENST00000414936 291 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.41□□□□□ -2.18
CKS1BP61024 PNRC2P1-201ENST00000423940 420 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.41□□□□□ -2.18
CKS1BP61024 UBE2D3P1-201ENST00000436669 444 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 SDR42E1P3-201ENST00000438345 502 ntBASIC1.41□□□□□ -2.18
CKS1BP61024 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.41□□□□□ -2.18
CKS1BP61024 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms