Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LIM2P55344 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
LIM2P55344 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LIM2P55344 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
LIM2P55344 AC009487.2-201ENST00000420969 6821 ntBASIC2.64□□□□□ -1.99
LIM2P55344 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LIM2P55344 RNU6-769P-201ENST00000384407 104 ntBASIC2.64□□□□□ -1.99
LIM2P55344 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.64□□□□□ -1.99
LIM2P55344 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.64□□□□□ -1.99
LIM2P55344 AC010099.3-201ENST00000423896 409 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 TAAR7P-201ENST00000436141 242 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 AC107083.1-201ENST00000439643 279 ntBASIC2.64□□□□□ -1.99
LIM2P55344 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.64□□□□□ -1.99
LIM2P55344 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
LIM2P55344 RPS3AP14-201ENST00000483907 780 ntBASIC2.64□□□□□ -1.99
LIM2P55344 RPL23AP41-201ENST00000484754 458 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 AC117522.3-201ENST00000507974 584 ntBASIC2.64□□□□□ -1.99
LIM2P55344 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 AC112673.1-201ENST00000513168 575 ntBASIC2.64□□□□□ -1.99
LIM2P55344 GMPSP1-201ENST00000514075 579 ntBASIC2.64□□□□□ -1.99
LIM2P55344 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.64□□□□□ -1.99
LIM2P55344 AC023538.1-201ENST00000534576 736 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.64□□□□□ -1.99
LIM2P55344 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.64□□□□□ -1.99
LIM2P55344 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.64□□□□□ -1.99
LIM2P55344 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.64□□□□□ -1.99
LIM2P55344 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.64□□□□□ -1.99
LIM2P55344 AP001004.1-201ENST00000582468 324 ntBASIC2.64□□□□□ -1.99
LIM2P55344 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
LIM2P55344 BCRP9-201ENST00000605312 388 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.64□□□□□ -1.99
LIM2P55344 AL607023.1-201ENST00000620045 248 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AL031667.3-201ENST00000620124 655 ntBASIC2.64□□□□□ -1.99
LIM2P55344 AP000676.3-201ENST00000623299 569 ntBASIC2.64□□□□□ -1.99
LIM2P55344 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LIM2P55344 AC006378.2-201ENST00000623178 2476 ntBASIC2.64□□□□□ -1.99
LIM2P55344 MTND5P33-201ENST00000571250 1450 ntBASIC2.64□□□□□ -1.99
LIM2P55344 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LIM2P55344 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
LIM2P55344 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIM2P55344 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIM2P55344 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LIM2P55344 MIR514A1-201ENST00000385133 98 ntBASIC2.63□□□□□ -1.99
LIM2P55344 RNA5SP38-201ENST00000410750 119 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AL359704.1-201ENST00000411586 781 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 RAP1BP1-201ENST00000412709 553 ntBASIC2.63□□□□□ -1.99
LIM2P55344 HMGB1P11-201ENST00000413899 637 ntBASIC2.63□□□□□ -1.99
LIM2P55344 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.63□□□□□ -1.99
LIM2P55344 AC018630.2-202ENST00000422992 927 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 FAM103A2P-201ENST00000444122 354 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC009237.8-201ENST00000445492 379 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.63□□□□□ -1.99
LIM2P55344 AC004263.1-201ENST00000479327 332 ntBASIC2.63□□□□□ -1.99
LIM2P55344 RPL9P33-201ENST00000484311 566 ntBASIC2.63□□□□□ -1.99
LIM2P55344 LINC00888-204ENST00000487386 421 ntBASIC2.63□□□□□ -1.99
LIM2P55344 CDC42P4-201ENST00000510507 563 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.63□□□□□ -1.99
LIM2P55344 AC010265.1-201ENST00000513509 211 ntBASIC2.63□□□□□ -1.99
LIM2P55344 MTATP6P15-201ENST00000527233 835 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.63□□□□□ -1.99
LIM2P55344 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIM2P55344 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.63□□□□□ -1.99
LIM2P55344 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.63□□□□□ -1.99
LIM2P55344 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 UBE2L4-201ENST00000587688 464 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 VN1R90P-201ENST00000595717 726 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.63□□□□□ -1.99
LIM2P55344 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.63□□□□□ -1.99
LIM2P55344 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 AC004908.2-201ENST00000609090 574 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC090132.2-201ENST00000615881 347 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AL603758.1-201ENST00000618654 241 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AL158801.5-201ENST00000623123 465 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC091965.5-201ENST00000624785 342 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AC019226.1-201ENST00000625666 515 ntBASIC2.63□□□□□ -1.99
LIM2P55344 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIM2P55344 AC099063.3-201ENST00000642066 185 ntBASIC2.63□□□□□ -1.99
LIM2P55344 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.63□□□□□ -1.99
LIM2P55344 AL138713.1-201ENST00000624026 2130 ntBASIC2.63□□□□□ -1.99
LIM2P55344 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LIM2P55344 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIM2P55344 AC012321.1-201ENST00000561622 1588 ntBASIC2.62□□□□□ -1.99
LIM2P55344 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC233263.6-201ENST00000631132 1963 ntBASIC2.62□□□□□ -1.99
LIM2P55344 MIR26A1-201ENST00000362205 77 ntBASIC2.62□□□□□ -1.99
LIM2P55344 RNU6-432P-201ENST00000384196 109 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms