Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 BX323014.1-201ENST00000412876 237 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH13P55290 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH13P55290 AC007389.2-201ENST00000434630 306 ntBASIC3.21□□□□□ -1.9
CDH13P55290 SETP8-201ENST00000435341 628 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH13P55290 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH13P55290 PGBD4P3-201ENST00000440731 581 ntBASIC3.21□□□□□ -1.9
CDH13P55290 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 CBWD4P-201ENST00000445695 655 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AC115115.1-201ENST00000449927 248 ntBASIC3.21□□□□□ -1.9
CDH13P55290 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RPL31P3-201ENST00000458430 332 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH13P55290 RPS20P22-201ENST00000473700 357 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH13P55290 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH13P55290 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RNU6-1282P-201ENST00000516735 96 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RNU1-45P-201ENST00000517191 141 ntBASIC3.21□□□□□ -1.9
CDH13P55290 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 CASP1P1-201ENST00000526345 212 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AP003122.4-201ENST00000530980 758 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH13P55290 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH13P55290 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
CDH13P55290 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
CDH13P55290 SNORD39.4-201ENST00000620099 78 ntBASIC3.21□□□□□ -1.9
CDH13P55290 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
CDH13P55290 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AL136313.1-201ENST00000624804 202 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
CDH13P55290 AL392088.2-201ENST00000637607 285 ntBASIC3.21□□□□□ -1.9
CDH13P55290 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
CDH13P55290 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH13P55290 AL356274.2-201ENST00000624379 3752 ntBASIC3.21□□□□□ -1.9
CDH13P55290 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH13P55290 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH13P55290 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH13P55290 RNA5SP119-201ENST00000362715 117 ntBASIC3.2□□□□□ -1.9
CDH13P55290 RNU6-741P-201ENST00000383889 107 ntBASIC3.2□□□□□ -1.9
CDH13P55290 MIR218-2-201ENST00000385006 110 ntBASIC3.2□□□□□ -1.9
CDH13P55290 MRPL42P2-201ENST00000403169 426 ntBASIC3.2□□□□□ -1.9
CDH13P55290 RNU2-8P-201ENST00000410727 190 ntBASIC3.2□□□□□ -1.9
CDH13P55290 HMGN1P14-201ENST00000412459 517 ntBASIC3.2□□□□□ -1.9
CDH13P55290 SPA17P1-201ENST00000416656 452 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC019097.1-201ENST00000424783 735 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH13P55290 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 GAPDHP27-201ENST00000447427 1020 ntBASIC3.2□□□□□ -1.9
CDH13P55290 PDSS1P2-201ENST00000449397 678 ntBASIC3.2□□□□□ -1.9
CDH13P55290 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 snoU109.1-201ENST00000459339 135 ntBASIC3.2□□□□□ -1.9
CDH13P55290 SNORD42A-201ENST00000459584 64 ntBASIC3.2□□□□□ -1.9
CDH13P55290 MTCO2P29-201ENST00000465212 189 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH13P55290 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
CDH13P55290 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH13P55290 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 APOOP4-201ENST00000513530 597 ntBASIC3.2□□□□□ -1.9
CDH13P55290 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 RNU6-390P-201ENST00000516259 103 ntBASIC3.2□□□□□ -1.9
CDH13P55290 ATP5F1P5-201ENST00000526403 760 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH13P55290 TRAV37-201ENST00000553906 342 ntBASIC3.2□□□□□ -1.9
CDH13P55290 HMGB1P14-201ENST00000557424 591 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH13P55290 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH13P55290 PIGPP4-201ENST00000584447 307 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC005771.1-201ENST00000585581 349 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC009977.1-201ENST00000586015 570 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC006130.2-201ENST00000586202 326 ntBASIC3.2□□□□□ -1.9
CDH13P55290 CKS1BP3-201ENST00000600888 237 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AL109618.2-201ENST00000605527 211 ntBASIC3.2□□□□□ -1.9
CDH13P55290 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH13P55290 SNORA51-201ENST00000606420 132 ntBASIC3.2□□□□□ -1.9
CDH13P55290 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH13P55290 AC006111.3-201ENST00000622137 383 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC039056.2-201ENST00000622261 511 ntBASIC3.2□□□□□ -1.9
CDH13P55290 AC034229.5-201ENST00000624258 185 ntBASIC3.2□□□□□ -1.9
CDH13P55290 CU459211.1-201ENST00000635667 749 ntBASIC3.2□□□□□ -1.9
CDH13P55290 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.2□□□□□ -1.9
CDH13P55290 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDH13P55290 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDH13P55290 AC021755.1-201ENST00000559747 1447 ntBASIC3.19□□□□□ -1.9
CDH13P55290 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH13P55290 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH13P55290 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH13P55290 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC022336.2-201ENST00000568966 2538 ntBASIC3.19□□□□□ -1.9
CDH13P55290 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
CDH13P55290 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CDH13P55290 SNORD116-1-201ENST00000384335 95 ntBASIC3.19□□□□□ -1.9
CDH13P55290 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms