Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH4P55283 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDH4P55283 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.63□□□□□ -1.99
CDH4P55283 SNORD116-12-201ENST00000384468 92 ntBASIC2.63□□□□□ -1.99
CDH4P55283 MIR27B-201ENST00000385129 97 ntBASIC2.63□□□□□ -1.99
CDH4P55283 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH4P55283 AL513175.2-201ENST00000422071 443 ntBASIC2.63□□□□□ -1.99
CDH4P55283 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH4P55283 AC236972.1-201ENST00000433225 199 ntBASIC2.63□□□□□ -1.99
CDH4P55283 CACYBPP2-201ENST00000453625 678 ntBASIC2.63□□□□□ -1.99
CDH4P55283 RPS3P1-201ENST00000456781 192 ntBASIC2.63□□□□□ -1.99
CDH4P55283 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH4P55283 RNU7-23P-201ENST00000459465 62 ntBASIC2.63□□□□□ -1.99
CDH4P55283 AC126182.1-201ENST00000478134 357 ntBASIC2.63□□□□□ -1.99
CDH4P55283 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.63□□□□□ -1.99
CDH4P55283 OR5BM1P-201ENST00000512021 366 ntBASIC2.63□□□□□ -1.99
CDH4P55283 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH4P55283 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH4P55283 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH4P55283 AC010546.1-201ENST00000569391 485 ntBASIC2.63□□□□□ -1.99
CDH4P55283 RPL23AP84-201ENST00000571193 464 ntBASIC2.63□□□□□ -1.99
CDH4P55283 NRBF2P5-201ENST00000603087 788 ntBASIC2.63□□□□□ -1.99
CDH4P55283 PART1_2.1-201ENST00000612397 250 ntBASIC2.63□□□□□ -1.99
CDH4P55283 SNHG22-203ENST00000617833 660 ntBASIC2.63□□□□□ -1.99
CDH4P55283 AC013437.2-201ENST00000639587 677 ntBASIC2.63□□□□□ -1.99
CDH4P55283 ZNF519P1-201ENST00000449011 1626 ntBASIC2.63□□□□□ -1.99
CDH4P55283 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
CDH4P55283 AL161781.1-201ENST00000354277 403 ntBASIC2.62□□□□□ -1.99
CDH4P55283 FTLP6-201ENST00000355274 422 ntBASIC2.62□□□□□ -1.99
CDH4P55283 RNU6-637P-201ENST00000384050 107 ntBASIC2.62□□□□□ -1.99
CDH4P55283 RNU6-1207P-201ENST00000384343 107 ntBASIC2.62□□□□□ -1.99
CDH4P55283 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
CDH4P55283 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH4P55283 MTCO2P25-201ENST00000447065 681 ntBASIC2.62□□□□□ -1.99
CDH4P55283 WASF1P1-201ENST00000447560 1131 ntBASIC2.62□□□□□ -1.99
CDH4P55283 AC009961.3-201ENST00000449832 765 ntBASIC2.62□□□□□ -1.99
CDH4P55283 AC087588.1-201ENST00000462203 316 ntBASIC2.62□□□□□ -1.99
CDH4P55283 UBE2DNL-203ENST00000474922 222 ntBASIC2.62□□□□□ -1.99
CDH4P55283 AC126389.1-201ENST00000477436 290 ntBASIC2.62□□□□□ -1.99
CDH4P55283 RPL23AP70-201ENST00000483361 460 ntBASIC2.62□□□□□ -1.99
CDH4P55283 MTND5P4-201ENST00000514978 288 ntBASIC2.62□□□□□ -1.99
CDH4P55283 AC010376.1-201ENST00000522101 334 ntBASIC2.62□□□□□ -1.99
CDH4P55283 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.62□□□□□ -1.99
CDH4P55283 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.62□□□□□ -1.99
CDH4P55283 BNIP3P27-201ENST00000599991 412 ntBASIC2.62□□□□□ -1.99
CDH4P55283 AC021749.1-201ENST00000604322 607 ntBASIC2.62□□□□□ -1.99
CDH4P55283 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
CDH4P55283 AL138960.2-201ENST00000625145 535 ntBASIC2.62□□□□□ -1.99
CDH4P55283 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
CDH4P55283 MIR4275-201ENST00000636486 87 ntBASIC2.62□□□□□ -1.99
CDH4P55283 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDH4P55283 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH4P55283 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH4P55283 Y_RNA.472-201ENST00000384322 102 ntBASIC2.61□□□□□ -1.99
CDH4P55283 Y_RNA.500-201ENST00000384466 111 ntBASIC2.61□□□□□ -1.99
CDH4P55283 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
CDH4P55283 RNU2-25P-201ENST00000411041 191 ntBASIC2.61□□□□□ -1.99
CDH4P55283 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.61□□□□□ -1.99
CDH4P55283 AC007919.1-201ENST00000429380 217 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH4P55283 AL049734.2-201ENST00000441066 616 ntBASIC2.61□□□□□ -1.99
CDH4P55283 MTCYBP3-201ENST00000445588 1137 ntBASIC2.61□□□□□ -1.99
CDH4P55283 CBWD4P-201ENST00000445695 655 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 AP000852.1-201ENST00000472460 573 ntBASIC2.61□□□□□ -1.99
CDH4P55283 RPL31P41-201ENST00000477967 372 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH4P55283 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH4P55283 RNA5SP148-201ENST00000516527 94 ntBASIC2.61□□□□□ -1.99
CDH4P55283 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
CDH4P55283 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CDH4P55283 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.61□□□□□ -1.99
CDH4P55283 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CDH4P55283 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH4P55283 AC005951.2-201ENST00000576282 495 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
CDH4P55283 MIR5092-201ENST00000583139 88 ntBASIC2.61□□□□□ -1.99
CDH4P55283 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.61□□□□□ -1.99
CDH4P55283 BNIP3P26-201ENST00000600827 554 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AC005014.3-201ENST00000605985 190 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AC103710.4-201ENST00000609301 899 ntBASIC2.61□□□□□ -1.99
CDH4P55283 AL161734.1-201ENST00000609720 557 ntBASIC2.61□□□□□ -1.99
CDH4P55283 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH4P55283 LINC02211-204ENST00000642024 1070 ntBASIC2.61□□□□□ -1.99
CDH4P55283 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
CDH4P55283 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.61□□□□□ -1.99
CDH4P55283 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDH4P55283 AL390862.1-201ENST00000635467 1469 ntBASIC2.6□□□□□ -1.99
CDH4P55283 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH4P55283 RNU6-359P-201ENST00000365466 108 ntBASIC2.6□□□□□ -1.99
CDH4P55283 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDH4P55283 RNU1-39P-201ENST00000383897 165 ntBASIC2.6□□□□□ -1.99
CDH4P55283 MIR627-201ENST00000384979 97 ntBASIC2.6□□□□□ -1.99
CDH4P55283 AC080125.1-201ENST00000414888 684 ntBASIC2.6□□□□□ -1.99
CDH4P55283 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms