Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RN7SL570P-201ENST00000484405 292 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 SNORD46.2-201ENST00000516021 102 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF144AP50876 MIR4282-201ENST00000583613 67 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF144AP50876 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF144AP50876 SRGNP1-201ENST00000603392 451 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF144AP50876 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF144AP50876 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF144AP50876 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF144AP50876 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RNF144AP50876 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RNF144AP50876 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF144AP50876 RBBP8P1-201ENST00000449447 1844 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF144AP50876 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 AC007938.2-201ENST00000604666 2634 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
RNF144AP50876 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 PHKBP1-201ENST00000450951 1951 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RNF144AP50876 SNORA25.1-201ENST00000362326 128 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 Y_RNA.123-201ENST00000363338 102 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 Y_RNA.275-201ENST00000364726 110 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 Y_RNA.286-201ENST00000364813 102 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 Y_RNA.343-201ENST00000365354 112 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 Y_RNA.418-201ENST00000384029 102 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 RN7SKP114-201ENST00000410327 279 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 AL117339.3-201ENST00000418733 162 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 RPS27AP12-201ENST00000429552 465 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF144AP50876 TOMM22P6-201ENST00000465035 409 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 AC007686.1-201ENST00000488511 463 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 AC074133.1-201ENST00000515696 183 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 RNU6-1219P-201ENST00000516143 112 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 RNU6-927P-201ENST00000516199 100 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 RN7SKP272-201ENST00000516988 232 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 SNORA43.3-201ENST00000517240 103 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.17□□□□□ -1.58
RNF144AP50876 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF144AP50876 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 AP001005.3-201ENST00000622049 129 ntBASIC5.17□□□□□ -1.58
RNF144AP50876 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF144AP50876 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF144AP50876 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF144AP50876 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RNF144AP50876 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF144AP50876 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RNF144AP50876 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 LINC01963-201ENST00000562038 3148 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AC092681.1-201ENST00000297369 291 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 MIR375-201ENST00000362103 64 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 RNU6-514P-201ENST00000384208 107 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 RNU4-30P-201ENST00000410245 143 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 RNU6-712P-201ENST00000410558 100 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 RNU6-1025P-201ENST00000410629 104 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 Y_RNA.623-201ENST00000411128 95 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF144AP50876 DPPA2P3-201ENST00000411853 655 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF144AP50876 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF144AP50876 TOMM20P4-201ENST00000427861 435 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AC010326.1-201ENST00000462726 602 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF144AP50876 RN7SL583P-201ENST00000475692 287 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF144AP50876 RNA5SP471-201ENST00000516971 106 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AP004609.2-201ENST00000532177 190 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AP005403.1-201ENST00000579720 229 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF144AP50876 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 AC073869.8-201ENST00000641806 335 ntBASIC5.16□□□□□ -1.58
RNF144AP50876 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF144AP50876 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF144AP50876 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF144AP50876 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF144AP50876 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF144AP50876 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF144AP50876 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms