Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SOX2P48431 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX2P48431 AC079741.1-201ENST00000321498 212 ntBASIC3.52□□□□□ -1.85
SOX2P48431 RNU6-1287P-201ENST00000362914 107 ntBASIC3.52□□□□□ -1.85
SOX2P48431 RNU6-767P-201ENST00000384132 107 ntBASIC3.52□□□□□ -1.85
SOX2P48431 RNU6-1060P-201ENST00000384664 107 ntBASIC3.52□□□□□ -1.85
SOX2P48431 RNU6-332P-201ENST00000391193 108 ntBASIC3.52□□□□□ -1.85
SOX2P48431 SOD2P1-201ENST00000396543 562 ntBASIC3.52□□□□□ -1.85
SOX2P48431 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX2P48431 MIR1183-201ENST00000408856 89 ntBASIC3.52□□□□□ -1.85
SOX2P48431 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 AC009161.1-201ENST00000417306 376 ntBASIC3.52□□□□□ -1.85
SOX2P48431 AC245054.1-201ENST00000420944 258 ntBASIC3.52□□□□□ -1.85
SOX2P48431 SRIP2-201ENST00000428470 166 ntBASIC3.52□□□□□ -1.85
SOX2P48431 RPS29P17-201ENST00000430795 166 ntBASIC3.52□□□□□ -1.85
SOX2P48431 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX2P48431 AC006466.1-201ENST00000438721 289 ntBASIC3.52□□□□□ -1.85
SOX2P48431 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX2P48431 RPL26P6-201ENST00000440913 438 ntBASIC3.52□□□□□ -1.85
SOX2P48431 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX2P48431 HMGN2P21-201ENST00000447764 270 ntBASIC3.52□□□□□ -1.85
SOX2P48431 AL118520.1-201ENST00000450770 291 ntBASIC3.52□□□□□ -1.85
SOX2P48431 MTND3P16-201ENST00000452205 344 ntBASIC3.52□□□□□ -1.85
SOX2P48431 SNRPFP3-201ENST00000457792 225 ntBASIC3.52□□□□□ -1.85
SOX2P48431 RPL23AP24-201ENST00000458203 385 ntBASIC3.52□□□□□ -1.85
SOX2P48431 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX2P48431 AC104806.1-201ENST00000508720 308 ntBASIC3.52□□□□□ -1.85
SOX2P48431 AC002456.2-201ENST00000509356 380 ntBASIC3.52□□□□□ -1.85
SOX2P48431 SNORA70.14-201ENST00000516205 110 ntBASIC3.52□□□□□ -1.85
SOX2P48431 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.52□□□□□ -1.85
SOX2P48431 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.52□□□□□ -1.85
SOX2P48431 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX2P48431 AC022968.1-201ENST00000567372 442 ntBASIC3.52□□□□□ -1.85
SOX2P48431 MIR5684-201ENST00000585074 65 ntBASIC3.52□□□□□ -1.85
SOX2P48431 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.52□□□□□ -1.85
SOX2P48431 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.52□□□□□ -1.85
SOX2P48431 Mico1.1-201ENST00000611698 204 ntBASIC3.52□□□□□ -1.85
SOX2P48431 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.52□□□□□ -1.85
SOX2P48431 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
SOX2P48431 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
SOX2P48431 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SOX2P48431 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.51□□□□□ -1.85
SOX2P48431 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.51□□□□□ -1.85
SOX2P48431 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SOX2P48431 Y_RNA.231-201ENST00000364358 102 ntBASIC3.51□□□□□ -1.85
SOX2P48431 RNA5SP167-201ENST00000365461 116 ntBASIC3.51□□□□□ -1.85
SOX2P48431 Y_RNA.576-201ENST00000384781 102 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AL162578.1-201ENST00000406202 378 ntBASIC3.51□□□□□ -1.85
SOX2P48431 EEF1A1P40-201ENST00000412883 573 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 AC008850.1-201ENST00000427546 362 ntBASIC3.51□□□□□ -1.85
SOX2P48431 CALM2P2-201ENST00000428512 440 ntBASIC3.51□□□□□ -1.85
SOX2P48431 COX6B1P7-201ENST00000430845 235 ntBASIC3.51□□□□□ -1.85
SOX2P48431 KCTD9P3-201ENST00000434597 1169 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 MTND4LP16-201ENST00000440828 295 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AC093019.1-201ENST00000443135 252 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX2P48431 ANP32BP2-201ENST00000454525 545 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 HMGB3P30-201ENST00000457863 606 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
SOX2P48431 RPS27AP13-201ENST00000498403 237 ntBASIC3.51□□□□□ -1.85
SOX2P48431 HMGB1P22-201ENST00000505315 124 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX2P48431 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.51□□□□□ -1.85
SOX2P48431 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 RANP3-201ENST00000530970 276 ntBASIC3.51□□□□□ -1.85
SOX2P48431 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX2P48431 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.51□□□□□ -1.85
SOX2P48431 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX2P48431 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX2P48431 AC010928.3-201ENST00000587712 541 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AL161729.3-201ENST00000603533 673 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AC100827.5-201ENST00000615883 426 ntBASIC3.51□□□□□ -1.85
SOX2P48431 RN7SL722P-201ENST00000617780 284 ntBASIC3.51□□□□□ -1.85
SOX2P48431 RN7SL565P-201ENST00000618246 284 ntBASIC3.51□□□□□ -1.85
SOX2P48431 AL360181.4-201ENST00000621752 134 ntBASIC3.51□□□□□ -1.85
SOX2P48431 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SOX2P48431 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SOX2P48431 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.51□□□□□ -1.85
SOX2P48431 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
SOX2P48431 NCAPGP1-201ENST00000505112 1814 ntBASIC3.51□□□□□ -1.85
SOX2P48431 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SOX2P48431 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SOX2P48431 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SOX2P48431 FAM35DP-201ENST00000323387 2712 ntBASIC3.5□□□□□ -1.85
SOX2P48431 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.5□□□□□ -1.85
SOX2P48431 UBE3AP2-201ENST00000429033 2259 ntBASIC3.5□□□□□ -1.85
SOX2P48431 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SOX2P48431 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SOX2P48431 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.5□□□□□ -1.85
SOX2P48431 RNU1-132P-201ENST00000364300 164 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms