Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA4P43681 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA4P43681 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA4P43681 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CHRNA4P43681 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.06□□□□□ -1.6
CHRNA4P43681 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA4P43681 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA4P43681 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AC007785.2-201ENST00000598627 1916 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 RNU4-44P-201ENST00000363050 141 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 SNORA58B-201ENST00000364259 136 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 RNU6-1325P-201ENST00000364905 105 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 RNU6-290P-201ENST00000365212 101 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 RNU6-946P-201ENST00000383878 107 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 SNORD116-18-201ENST00000383961 92 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 Y_RNA.435-201ENST00000384095 112 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AL030996.1-201ENST00000411430 235 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 DDX39BP1-205ENST00000422507 192 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AL591704.1-201ENST00000432574 275 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AP001324.2-201ENST00000461163 319 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 RN7SL432P-201ENST00000484057 298 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA4P43681 PDCD5P2-201ENST00000507570 312 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC007016.1-201ENST00000512110 244 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC005798.1-201ENST00000513715 387 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 RNA5SP43-201ENST00000516559 110 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC092490.3-201ENST00000545370 572 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AC011447.4-201ENST00000587562 111 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AL158827.2-201ENST00000602494 330 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AL121917.1-203ENST00000605534 577 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.06□□□□□ -1.6
CHRNA4P43681 AP001784.1-201ENST00000624107 428 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 AL691447.3-201ENST00000635020 330 ntBASIC5.06□□□□□ -1.6
CHRNA4P43681 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHRNA4P43681 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA4P43681 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA4P43681 RNU6-1130P-201ENST00000365434 107 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.05□□□□□ -1.6
CHRNA4P43681 Y_RNA.488-201ENST00000384403 102 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 SNORA66-201ENST00000384792 133 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRNA4P43681 MTCYBP2-201ENST00000407745 171 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 RNA5SP111-201ENST00000411386 101 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRNA4P43681 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA4P43681 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA4P43681 BX679664.1-201ENST00000434429 253 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AL354714.3-201ENST00000447284 493 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.05□□□□□ -1.6
CHRNA4P43681 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRNA4P43681 COX6B1P5-201ENST00000509843 249 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AC108043.1-201ENST00000512696 574 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AC004980.4-201ENST00000513375 203 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 RNU6-496P-201ENST00000516145 99 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 RN7SKP260-201ENST00000516907 149 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AL133271.1-201ENST00000538229 291 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AC112693.2-201ENST00000556538 232 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.05□□□□□ -1.6
CHRNA4P43681 RPL7P50-201ENST00000600588 727 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 AL162424.1-201ENST00000602325 221 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA4P43681 AC243829.7-201ENST00000633081 225 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 OR4G2P-202ENST00000641004 1759 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRNA4P43681 AC104623.2-202ENST00000623477 4002 ntBASIC5.05□□□□□ -1.6
CHRNA4P43681 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRNA4P43681 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CHRNA4P43681 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA4P43681 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.05□□□□□ -1.6
CHRNA4P43681 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA4P43681 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHRNA4P43681 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.05□□□□□ -1.6
CHRNA4P43681 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA4P43681 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CHRNA4P43681 AC130650.2-201ENST00000618736 2403 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CHRNA4P43681 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA4P43681 HSPA8P4-201ENST00000511877 1920 ntBASIC5.04□□□□□ -1.6
CHRNA4P43681 Y_RNA.143-201ENST00000363520 106 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms