Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.74□□□□□ -1.97
SSR1P43307 DEFB108D-201ENST00000527787 222 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSR1P43307 AC118942.1-201ENST00000529674 1035 ntBASIC2.74□□□□□ -1.97
SSR1P43307 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SSR1P43307 AC023824.2-201ENST00000566185 400 ntBASIC2.74□□□□□ -1.97
SSR1P43307 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.74□□□□□ -1.97
SSR1P43307 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AL390838.2-201ENST00000602394 274 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.74□□□□□ -1.97
SSR1P43307 AC005332.10-201ENST00000612725 619 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AC009090.3-201ENST00000616553 565 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AC106858.1-201ENST00000637497 429 ntBASIC2.74□□□□□ -1.97
SSR1P43307 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSR1P43307 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.74□□□□□ -1.97
SSR1P43307 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SSR1P43307 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
SSR1P43307 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSR1P43307 SNORD62.1-201ENST00000362541 86 ntBASIC2.73□□□□□ -1.97
SSR1P43307 Y_RNA.234-201ENST00000364409 97 ntBASIC2.73□□□□□ -1.97
SSR1P43307 RNU6-1122P-201ENST00000384449 107 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AL355143.1-201ENST00000407101 841 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AL590084.1-201ENST00000407885 387 ntBASIC2.73□□□□□ -1.97
SSR1P43307 U3.40-201ENST00000408706 208 ntBASIC2.73□□□□□ -1.97
SSR1P43307 TPMTP2-201ENST00000414372 726 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.73□□□□□ -1.97
SSR1P43307 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.73□□□□□ -1.97
SSR1P43307 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SSR1P43307 AC105272.1-201ENST00000438604 198 ntBASIC2.73□□□□□ -1.97
SSR1P43307 WASF1P1-201ENST00000447560 1131 ntBASIC2.73□□□□□ -1.97
SSR1P43307 RPS15AP27-201ENST00000449183 343 ntBASIC2.73□□□□□ -1.97
SSR1P43307 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSR1P43307 AC026801.2-201ENST00000515352 425 ntBASIC2.73□□□□□ -1.97
SSR1P43307 RNU6-150P-201ENST00000516237 95 ntBASIC2.73□□□□□ -1.97
SSR1P43307 BTF3P12-201ENST00000519620 469 ntBASIC2.73□□□□□ -1.97
SSR1P43307 ATP5F1P5-201ENST00000526403 760 ntBASIC2.73□□□□□ -1.97
SSR1P43307 LRRC6P1-201ENST00000532188 885 ntBASIC2.73□□□□□ -1.97
SSR1P43307 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSR1P43307 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.73□□□□□ -1.97
SSR1P43307 AGGF1P5-201ENST00000567900 919 ntBASIC2.73□□□□□ -1.97
SSR1P43307 BNIP3P31-201ENST00000604515 566 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AL158211.4-201ENST00000606988 584 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AL603758.1-201ENST00000618654 241 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AC011330.2-201ENST00000621680 635 ntBASIC2.73□□□□□ -1.97
SSR1P43307 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.73□□□□□ -1.97
SSR1P43307 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.73□□□□□ -1.97
SSR1P43307 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SSR1P43307 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SSR1P43307 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SSR1P43307 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SSR1P43307 RNU6-1000P-201ENST00000391066 106 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.72□□□□□ -1.97
SSR1P43307 AC234781.2-201ENST00000426370 994 ntBASIC2.72□□□□□ -1.97
SSR1P43307 NANOGP2-201ENST00000435391 727 ntBASIC2.72□□□□□ -1.97
SSR1P43307 MTND2P20-201ENST00000440805 661 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC011816.1-201ENST00000441346 546 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.72□□□□□ -1.97
SSR1P43307 AC025750.2-201ENST00000442609 450 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC002381.1-201ENST00000447049 280 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC097493.1-201ENST00000463958 372 ntBASIC2.72□□□□□ -1.97
SSR1P43307 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.72□□□□□ -1.97
SSR1P43307 HSPE1P6-201ENST00000479457 291 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC079203.1-201ENST00000487972 404 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.72□□□□□ -1.97
SSR1P43307 AC006499.2-201ENST00000513470 337 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.72□□□□□ -1.97
SSR1P43307 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.72□□□□□ -1.97
SSR1P43307 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.72□□□□□ -1.97
SSR1P43307 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SSR1P43307 VN1R90P-201ENST00000595717 726 ntBASIC2.72□□□□□ -1.97
SSR1P43307 BBIP1P1-201ENST00000602999 279 ntBASIC2.72□□□□□ -1.97
SSR1P43307 MTND3P19-201ENST00000603825 345 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AL596245.1-201ENST00000618994 362 ntBASIC2.72□□□□□ -1.97
SSR1P43307 AL031601.2-202ENST00000622650 282 ntBASIC2.72□□□□□ -1.97
SSR1P43307 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.72□□□□□ -1.97
SSR1P43307 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSR1P43307 TPTE2P4-201ENST00000258589 1605 ntBASIC2.71□□□□□ -1.97
SSR1P43307 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
SSR1P43307 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 RNU5E-8P-201ENST00000363502 116 ntBASIC2.71□□□□□ -1.98
SSR1P43307 MIR514A1-201ENST00000385133 98 ntBASIC2.71□□□□□ -1.98
SSR1P43307 RPLP0P7-201ENST00000416050 667 ntBASIC2.71□□□□□ -1.98
SSR1P43307 AC018630.2-202ENST00000422992 927 ntBASIC2.71□□□□□ -1.98
SSR1P43307 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.71□□□□□ -1.98
SSR1P43307 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.71□□□□□ -1.98
SSR1P43307 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.71□□□□□ -1.98
SSR1P43307 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.71□□□□□ -1.98
SSR1P43307 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 RPS27P21-201ENST00000486977 252 ntBASIC2.71□□□□□ -1.98
SSR1P43307 MRPS36P2-201ENST00000512569 299 ntBASIC2.71□□□□□ -1.98
SSR1P43307 HSPA8P13-201ENST00000523715 472 ntBASIC2.71□□□□□ -1.98
SSR1P43307 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.71□□□□□ -1.98
SSR1P43307 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.71□□□□□ -1.98
SSR1P43307 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.71□□□□□ -1.98
SSR1P43307 HMGB1P14-201ENST00000557424 591 ntBASIC2.71□□□□□ -1.98
SSR1P43307 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms