Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MIR325-201ENST00000385260 98 ntBASIC2.58□□□□□ -2
FDFT1P37268 SNORA48.2-201ENST00000390926 124 ntBASIC2.58□□□□□ -2
FDFT1P37268 RPL23AP29-201ENST00000397284 453 ntBASIC2.58□□□□□ -2
FDFT1P37268 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
FDFT1P37268 MTATP6P20-201ENST00000414147 562 ntBASIC2.58□□□□□ -2
FDFT1P37268 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.58□□□□□ -2
FDFT1P37268 AC099548.1-201ENST00000421443 426 ntBASIC2.58□□□□□ -2
FDFT1P37268 AC098614.2-201ENST00000426040 255 ntBASIC2.58□□□□□ -2
FDFT1P37268 AL358075.3-201ENST00000426289 226 ntBASIC2.58□□□□□ -2
FDFT1P37268 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
FDFT1P37268 ATP5F1P1-201ENST00000433775 569 ntBASIC2.58□□□□□ -2
FDFT1P37268 CYCSP32-201ENST00000440548 321 ntBASIC2.58□□□□□ -2
FDFT1P37268 FGF7P5-201ENST00000441829 291 ntBASIC2.58□□□□□ -2
FDFT1P37268 MTCYBP3-201ENST00000445588 1137 ntBASIC2.58□□□□□ -2
FDFT1P37268 WASF1P1-201ENST00000447560 1131 ntBASIC2.58□□□□□ -2
FDFT1P37268 ZNF886P-201ENST00000450781 723 ntBASIC2.58□□□□□ -2
FDFT1P37268 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.58□□□□□ -2
FDFT1P37268 SNORD109B-201ENST00000458961 67 ntBASIC2.58□□□□□ -2
FDFT1P37268 SNORD109A-201ENST00000459128 67 ntBASIC2.58□□□□□ -2
FDFT1P37268 AL049874.1-201ENST00000489560 388 ntBASIC2.58□□□□□ -2
FDFT1P37268 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.58□□□□□ -2
FDFT1P37268 RNU6-714P-201ENST00000516963 103 ntBASIC2.58□□□□□ -2
FDFT1P37268 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
FDFT1P37268 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.58□□□□□ -2
FDFT1P37268 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
FDFT1P37268 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.58□□□□□ -2
FDFT1P37268 SUB1P1-201ENST00000524415 382 ntBASIC2.58□□□□□ -2
FDFT1P37268 DEFB131D-201ENST00000526803 184 ntBASIC2.58□□□□□ -2
FDFT1P37268 AP002748.2-201ENST00000528671 348 ntBASIC2.58□□□□□ -2
FDFT1P37268 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.58□□□□□ -2
FDFT1P37268 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.58□□□□□ -2
FDFT1P37268 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.58□□□□□ -2
FDFT1P37268 AL161756.2-201ENST00000604597 246 ntBASIC2.58□□□□□ -2
FDFT1P37268 AL161734.1-201ENST00000609720 557 ntBASIC2.58□□□□□ -2
FDFT1P37268 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.58□□□□□ -2
FDFT1P37268 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
FDFT1P37268 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
FDFT1P37268 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
FDFT1P37268 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
FDFT1P37268 OR4G2P-202ENST00000641004 1759 ntBASIC2.57□□□□□ -2
FDFT1P37268 OR5J1P-201ENST00000313544 939 ntBASIC2.57□□□□□ -2
FDFT1P37268 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
FDFT1P37268 Y_RNA.311-201ENST00000365068 96 ntBASIC2.57□□□□□ -2
FDFT1P37268 SET-203ENST00000372688 801 ntTSL 2 BASIC2.57□□□□□ -2
FDFT1P37268 RNU6-741P-201ENST00000383889 107 ntBASIC2.57□□□□□ -2
FDFT1P37268 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.57□□□□□ -2
FDFT1P37268 ERHP2-201ENST00000402323 299 ntBASIC2.57□□□□□ -2
FDFT1P37268 MIR1284-201ENST00000408337 120 ntBASIC2.57□□□□□ -2
FDFT1P37268 RNU4-22P-201ENST00000411058 166 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.57□□□□□ -2
FDFT1P37268 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
FDFT1P37268 AP000936.2-201ENST00000447151 681 ntBASIC2.57□□□□□ -2
FDFT1P37268 EXOSC3P1-201ENST00000448649 500 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC009961.3-201ENST00000449832 765 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC005410.1-202ENST00000460347 485 ntBASIC2.57□□□□□ -2
FDFT1P37268 AP000852.1-201ENST00000472460 573 ntBASIC2.57□□□□□ -2
FDFT1P37268 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.57□□□□□ -2
FDFT1P37268 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.57□□□□□ -2
FDFT1P37268 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
FDFT1P37268 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.57□□□□□ -2
FDFT1P37268 CYCSP2-201ENST00000558168 301 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.57□□□□□ -2
FDFT1P37268 MTND3P19-201ENST00000603825 345 ntBASIC2.57□□□□□ -2
FDFT1P37268 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC135507.2-201ENST00000612443 309 ntBASIC2.57□□□□□ -2
FDFT1P37268 AC109809.1-201ENST00000619665 545 ntBASIC2.57□□□□□ -2
FDFT1P37268 AP001002.2-201ENST00000625137 386 ntBASIC2.57□□□□□ -2
FDFT1P37268 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.57□□□□□ -2
FDFT1P37268 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.57□□□□□ -2
FDFT1P37268 AC116618.1-201ENST00000634617 774 ntBASIC2.57□□□□□ -2
FDFT1P37268 AL445984.1-201ENST00000637834 659 ntBASIC2.57□□□□□ -2
FDFT1P37268 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.57□□□□□ -2
FDFT1P37268 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
FDFT1P37268 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
FDFT1P37268 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
FDFT1P37268 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
FDFT1P37268 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
FDFT1P37268 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
FDFT1P37268 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.56□□□□□ -2
FDFT1P37268 RNU6-97P-201ENST00000363387 104 ntBASIC2.56□□□□□ -2
FDFT1P37268 MIR483-201ENST00000385070 76 ntBASIC2.56□□□□□ -2
FDFT1P37268 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.56□□□□□ -2
FDFT1P37268 AL162578.1-201ENST00000406202 378 ntBASIC2.56□□□□□ -2
FDFT1P37268 VN1R51P-201ENST00000411675 945 ntBASIC2.56□□□□□ -2
FDFT1P37268 TPMTP3-201ENST00000411928 735 ntBASIC2.56□□□□□ -2
FDFT1P37268 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.56□□□□□ -2
FDFT1P37268 MTCO2P17-201ENST00000424336 677 ntBASIC2.56□□□□□ -2
FDFT1P37268 BX119904.4-201ENST00000424402 301 ntBASIC2.56□□□□□ -2
FDFT1P37268 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.56□□□□□ -2
FDFT1P37268 Z82210.1-201ENST00000440037 231 ntBASIC2.56□□□□□ -2
FDFT1P37268 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.56□□□□□ -2
FDFT1P37268 BNIP3P2-201ENST00000441221 577 ntBASIC2.56□□□□□ -2
FDFT1P37268 MTND5P14-201ENST00000441481 1267 ntBASIC2.56□□□□□ -2
FDFT1P37268 MTND2P24-201ENST00000453434 806 ntBASIC2.56□□□□□ -2
FDFT1P37268 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.56□□□□□ -2
FDFT1P37268 AC092155.2-201ENST00000454675 477 ntBASIC2.56□□□□□ -2
FDFT1P37268 MTND2P39-201ENST00000457230 764 ntBASIC2.56□□□□□ -2
FDFT1P37268 RPL30P9-201ENST00000465586 330 ntBASIC2.56□□□□□ -2
FDFT1P37268 RPS3AP14-201ENST00000483907 780 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms