Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM23P36406 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM23P36406 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM23P36406 AC107016.2-201ENST00000547968 190 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM23P36406 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM23P36406 AC008751.2-201ENST00000597885 980 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AP001429.1-201ENST00000602568 530 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AP000811.1-201ENST00000603803 651 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AC112187.2-201ENST00000604345 283 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AL033523.1-201ENST00000605153 153 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AL158211.4-201ENST00000606988 584 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AL355816.2-201ENST00000610049 647 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AL450472.3-201ENST00000615578 367 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 PCMTD1P7-201ENST00000634506 357 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM23P36406 AP000526.1-201ENST00000603308 1388 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM23P36406 MTND5P19-201ENST00000424872 1794 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 AC009902.3-201ENST00000606235 2172 ntBASIC2.94□□□□□ -1.94
TRIM23P36406 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM23P36406 RNY4P24-201ENST00000362735 96 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RNU6-433P-201ENST00000363216 104 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RNU6-1078P-201ENST00000364522 103 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RNU6-253P-201ENST00000384730 105 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RNU6-1197P-201ENST00000391183 107 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM23P36406 FO393413.1-201ENST00000402892 195 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RNA5SP274-201ENST00000410484 108 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RPL7P8-201ENST00000411964 730 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 AL356867.1-201ENST00000429623 299 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM23P36406 AP000542.1-201ENST00000448473 371 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM23P36406 AP001486.1-201ENST00000463339 476 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 RPS29P26-201ENST00000477483 171 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 AL049873.1-201ENST00000480540 376 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM23P36406 MTND1P22-201ENST00000510572 951 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 MTND5P4-201ENST00000514978 288 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 Y_RNA.717-201ENST00000517106 92 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM23P36406 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM23P36406 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.93□□□□□ -1.94
TRIM23P36406 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM23P36406 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM23P36406 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.93□□□□□ -1.94
TRIM23P36406 MTCO3P13-201ENST00000577757 781 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM23P36406 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM23P36406 AC069234.5-201ENST00000611056 416 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 AC008443.7-201ENST00000622195 246 ntBASIC2.93□□□□□ -1.94
TRIM23P36406 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM23P36406 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TRIM23P36406 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM23P36406 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM23P36406 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM23P36406 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM23P36406 AC096644.4-201ENST00000563417 2912 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM23P36406 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM23P36406 AP000568.1-201ENST00000282964 442 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TRIM23P36406 RNU6-799P-201ENST00000363567 107 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 RNU6-777P-201ENST00000364265 104 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 Y_RNA.302-201ENST00000364997 102 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 RNU6-76P-201ENST00000384060 104 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 MIR634-201ENST00000385208 97 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 RNU6-754P-201ENST00000391166 107 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 RPL21P3-201ENST00000395517 478 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AL590383.1-201ENST00000428602 75 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AC022018.1-201ENST00000430685 241 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM23P36406 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM23P36406 RPL35AP22-201ENST00000436855 335 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 LINC00888-204ENST00000487386 421 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 HMGB1P36-201ENST00000487709 576 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AIG1P1-201ENST00000503376 148 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 SEM1P1-201ENST00000506694 209 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 RNU6-678P-201ENST00000516832 109 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 HMGN1P28-201ENST00000521340 364 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 ELOCP32-201ENST00000548625 324 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM23P36406 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM23P36406 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM23P36406 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM23P36406 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM23P36406 VN1R90P-201ENST00000595717 726 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AC018714.1-201ENST00000605028 208 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AL137843.1-201ENST00000605078 385 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM23P36406 AC140725.3-201ENST00000616193 880 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AL607023.1-201ENST00000620045 248 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM23P36406 AL031667.3-201ENST00000620124 655 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AP000770.2-201ENST00000623694 100 ntBASIC2.92□□□□□ -1.94
TRIM23P36406 AL356596.1-201ENST00000624230 379 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms