Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXD12P35452 HMGN2P31-201ENST00000432430 273 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD12P35452 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD12P35452 AL353572.1-201ENST00000442490 417 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 RAC1P7-201ENST00000445367 377 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 PRDX3P3-201ENST00000447765 522 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 AC234775.1-201ENST00000454247 670 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXD12P35452 AC019235.1-201ENST00000503847 207 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD12P35452 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD12P35452 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXD12P35452 RPS3AP4-201ENST00000555161 764 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXD12P35452 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXD12P35452 MIR5187-201ENST00000583479 76 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD12P35452 MIR8058-201ENST00000615737 89 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD12P35452 AC090740.1-201ENST00000623193 2262 ntBASIC3.9□□□□□ -1.79
HOXD12P35452 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 AC004520.1-201ENST00000608362 1413 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD12P35452 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 RNU4-1-201ENST00000363925 141 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 Y_RNA.409-201ENST00000383990 98 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 RNU2-43P-201ENST00000410306 190 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HOXD12P35452 RPL27AP8-201ENST00000424277 446 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD12P35452 AC007283.2-201ENST00000424739 197 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD12P35452 FTH1P1-201ENST00000437933 532 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD12P35452 AC027673.1-201ENST00000456245 405 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD12P35452 U3.44-201ENST00000458938 192 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 RPL23AP14-201ENST00000468281 468 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AC012181.1-201ENST00000479895 423 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AC020893.1-201ENST00000502452 580 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD12P35452 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD12P35452 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXD12P35452 AC068135.2-201ENST00000569293 1028 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 MTCO3P24-201ENST00000572729 782 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD12P35452 KC877982.1-201ENST00000602313 470 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HOXD12P35452 AL356321.1-201ENST00000621360 228 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AL357559.1-201ENST00000622228 274 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 U6.105-201ENST00000637379 88 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD12P35452 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 AC118273.1-201ENST00000525324 3006 ntBASIC3.89□□□□□ -1.79
HOXD12P35452 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD12P35452 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD12P35452 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD12P35452 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD12P35452 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXD12P35452 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD12P35452 RNY1P12-201ENST00000364251 105 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 Y_RNA.256-201ENST00000364594 104 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXD12P35452 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD12P35452 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXD12P35452 Y_RNA.450-201ENST00000384198 113 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 MIR19A-201ENST00000384878 82 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 RNU6-780P-201ENST00000391030 104 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 Y_RNA.604-201ENST00000410574 102 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AC022028.1-201ENST00000412054 408 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 HMGN1P24-201ENST00000412282 298 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 RPL21P109-201ENST00000422213 475 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AP000907.1-201ENST00000428428 510 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 TIMM9P1-201ENST00000436122 256 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AC083863.1-201ENST00000438811 231 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD12P35452 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD12P35452 AC023194.1-201ENST00000493084 308 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 ARL4AP2-201ENST00000507378 601 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD12P35452 RNU6-352P-201ENST00000516908 107 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 RNU6-528P-201ENST00000516926 100 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 OR5AQ1P-201ENST00000527596 927 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD12P35452 SNORA59B-202ENST00000578183 701 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 COX6CP3-201ENST00000580869 223 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD12P35452 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXD12P35452 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXD12P35452 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD12P35452 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD12P35452 AP002360.4-201ENST00000606980 481 ntBASIC3.88□□□□□ -1.79
HOXD12P35452 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD12P35452 MIR3688-2-201ENST00000636963 87 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms