Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC6A4P31645 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC6A4P31645 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A4P31645 VN1R80P-201ENST00000597126 338 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 AC012669.1-201ENST00000603209 283 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 AC128687.2-201ENST00000609657 566 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 AC009233.1-201ENST00000616477 371 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC6A4P31645 AC243312.2-201ENST00000623340 601 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC6A4P31645 AL161912.2-201ENST00000565707 3007 ntBASIC4.09□□□□□ -1.75
SLC6A4P31645 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SLC6A4P31645 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A4P31645 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A4P31645 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.09□□□□□ -1.76
SLC6A4P31645 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.09□□□□□ -1.76
SLC6A4P31645 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A4P31645 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC6A4P31645 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC6A4P31645 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC6A4P31645 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC6A4P31645 MIR124-3-201ENST00000384866 87 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC6A4P31645 AL162578.1-201ENST00000406202 378 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RN7SKP32-201ENST00000410167 303 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RNU2-43P-201ENST00000410306 190 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 OR6C66P-201ENST00000414917 930 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 ARL5AP1-201ENST00000418991 388 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC6A4P31645 NCOR1P3-201ENST00000420479 303 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 MTCYBP8-201ENST00000422855 651 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC6A4P31645 RAC1P6-201ENST00000423911 575 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RWDD4P2-201ENST00000426392 563 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RPL7P2-201ENST00000427639 268 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RPL7P12-201ENST00000446719 750 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AL358232.1-201ENST00000448030 501 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RPS29P15-201ENST00000458329 171 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 RN7SL542P-201ENST00000467147 294 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AC022690.1-201ENST00000526681 550 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 OR5AL2P-201ENST00000532185 920 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AC243972.3-201ENST00000539655 198 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AP001029.3-201ENST00000588063 596 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AC006065.5-201ENST00000623427 349 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC6A4P31645 AC100810.6-201ENST00000638068 285 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 AL645937.1-201ENST00000641739 1652 ntBASIC4.08□□□□□ -1.76
SLC6A4P31645 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC6A4P31645 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AC011266.1-201ENST00000624119 3569 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SLC6A4P31645 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 MTND4P14-201ENST00000435799 1354 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 ASNSP3-201ENST00000451989 1306 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 RNU6-552P-201ENST00000362869 119 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 Y_RNA.100-201ENST00000363141 102 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 Y_RNA.231-201ENST00000364358 102 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 U3.15-201ENST00000365398 212 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 PTMAP2-201ENST00000397627 327 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 RPL35AP12-201ENST00000425362 338 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AL365400.1-201ENST00000431854 640 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 ERLEC1P1-201ENST00000433806 578 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC6A4P31645 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC6A4P31645 PPIAP15-201ENST00000479662 484 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 FGF7P4-201ENST00000509595 295 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AC087369.1-201ENST00000520775 996 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC093012.1-202ENST00000549403 582 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 MIR4703-201ENST00000577728 79 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC6A4P31645 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AL356055.1-201ENST00000602528 446 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC008739.3-201ENST00000603262 127 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC093913.1-201ENST00000614178 329 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 AC010133.1-201ENST00000615809 842 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 FP236240.3-201ENST00000623061 327 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AL365440.1-201ENST00000436135 2167 ntBASIC4.07□□□□□ -1.76
SLC6A4P31645 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC6A4P31645 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SLC6A4P31645 AL136964.1-201ENST00000622038 2990 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms