Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC8P31273 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HOXC8P31273 MTCYBP36-201ENST00000404146 440 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 RPL5P18-201ENST00000406671 891 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 MIR1290-201ENST00000408735 78 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 MTCO1P21-201ENST00000416634 589 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 COTL1P1-201ENST00000422309 375 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 TMEM167AP1-201ENST00000423409 219 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 RPL35AP12-201ENST00000425362 338 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC8P31273 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC8P31273 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC8P31273 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC8P31273 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 RNU6-528P-201ENST00000516926 100 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 HMGN1P28-201ENST00000521340 364 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC8P31273 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC8P31273 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC8P31273 MIR3921-201ENST00000577308 85 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AL353997.4-201ENST00000586196 166 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AC090186.1-201ENST00000605991 572 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC8P31273 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC8P31273 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC8P31273 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC8P31273 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC8P31273 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC8P31273 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC8P31273 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC8P31273 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HOXC8P31273 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC8P31273 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC8P31273 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
HOXC8P31273 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC8P31273 AC090740.1-201ENST00000623193 2262 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC8P31273 RNU6-289P-201ENST00000364093 107 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 RNU6-777P-201ENST00000364265 104 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC8P31273 RNU6-1207P-201ENST00000384343 107 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC8P31273 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 MTND1P34-201ENST00000438556 671 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 ST13P20-201ENST00000447996 1065 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC8P31273 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 AC140076.1-201ENST00000449897 361 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 AC079140.3-201ENST00000511111 550 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 MTND5P4-201ENST00000514978 288 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 FAM60DP-201ENST00000524174 632 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
HOXC8P31273 MTCO3P24-201ENST00000572729 782 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 AC012065.4-201ENST00000602445 679 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC078795.2-201ENST00000602835 1252 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC087752.4-201ENST00000605911 462 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AL158211.4-201ENST00000606988 584 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC009509.4-201ENST00000619202 509 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 U7.8-201ENST00000619968 63 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC006111.3-201ENST00000622137 383 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AC009812.4-201ENST00000569134 1805 ntBASIC3.48□□□□□ -1.85
HOXC8P31273 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
HOXC8P31273 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC8P31273 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC8P31273 FAM35BP-202ENST00000497389 3337 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXC8P31273 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXC8P31273 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HOXC8P31273 RNU5F-6P-201ENST00000362979 116 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 RNU6-1078P-201ENST00000364522 103 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXC8P31273 MIR493-201ENST00000385254 89 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 DEFB108C-201ENST00000400154 252 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 AL663109.1-201ENST00000411498 844 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXC8P31273 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HOXC8P31273 UBE2D3P2-201ENST00000424409 445 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 USP9YP28-201ENST00000435142 589 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXC8P31273 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC8P31273 UBE2V1P13-201ENST00000436983 439 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 MTND1P9-201ENST00000453775 944 ntBASIC3.47□□□□□ -1.85
HOXC8P31273 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC8P31273 RNA5SP310-201ENST00000459084 116 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms