Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC096533.1-201ENST00000411645 353 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.91□□□□□ -2.1
CLIP1P30622 SNRPEP4-201ENST00000435815 279 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
CLIP1P30622 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.91□□□□□ -2.1
CLIP1P30622 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.91□□□□□ -2.1
CLIP1P30622 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.91□□□□□ -2.1
CLIP1P30622 AC011604.1-201ENST00000545978 196 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.91□□□□□ -2.1
CLIP1P30622 AC013553.2-201ENST00000604244 589 ntBASIC1.91□□□□□ -2.1
CLIP1P30622 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CLIP1P30622 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.9□□□□□ -2.11
CLIP1P30622 AC013268.2-201ENST00000420753 337 ntBASIC1.9□□□□□ -2.11
CLIP1P30622 AC233728.2-201ENST00000425348 757 ntBASIC1.9□□□□□ -2.11
CLIP1P30622 AC025768.1-201ENST00000510057 267 ntBASIC1.9□□□□□ -2.11
CLIP1P30622 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.9□□□□□ -2.11
CLIP1P30622 CASP1P1-201ENST00000526345 212 ntBASIC1.9□□□□□ -2.11
CLIP1P30622 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.9□□□□□ -2.11
CLIP1P30622 AC245128.3-201ENST00000594721 748 ntBASIC1.9□□□□□ -2.11
CLIP1P30622 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
CLIP1P30622 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CLIP1P30622 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLIP1P30622 RNU4-91P-201ENST00000364778 135 ntBASIC1.89□□□□□ -2.11
CLIP1P30622 Y_RNA.354-201ENST00000365448 111 ntBASIC1.89□□□□□ -2.11
CLIP1P30622 RNU4-65P-201ENST00000410473 140 ntBASIC1.89□□□□□ -2.11
CLIP1P30622 AL360221.1-201ENST00000445989 335 ntBASIC1.89□□□□□ -2.11
CLIP1P30622 KLRA1P-201ENST00000503499 986 ntBASIC1.89□□□□□ -2.11
CLIP1P30622 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.89□□□□□ -2.11
CLIP1P30622 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.89□□□□□ -2.11
CLIP1P30622 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CLIP1P30622 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLIP1P30622 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
CLIP1P30622 AL390862.1-201ENST00000635467 1469 ntBASIC1.88□□□□□ -2.11
CLIP1P30622 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.88□□□□□ -2.11
CLIP1P30622 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.88□□□□□ -2.11
CLIP1P30622 CKS1BP5-201ENST00000434172 273 ntBASIC1.88□□□□□ -2.11
CLIP1P30622 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLIP1P30622 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.88□□□□□ -2.11
CLIP1P30622 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
CLIP1P30622 AC069277.2-201ENST00000454211 432 ntBASIC1.88□□□□□ -2.11
CLIP1P30622 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.88□□□□□ -2.11
CLIP1P30622 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.88□□□□□ -2.11
CLIP1P30622 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
CLIP1P30622 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.88□□□□□ -2.11
CLIP1P30622 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.88□□□□□ -2.11
CLIP1P30622 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
CLIP1P30622 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLIP1P30622 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLIP1P30622 AL023807.1-201ENST00000407932 359 ntBASIC1.87□□□□□ -2.11
CLIP1P30622 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
CLIP1P30622 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.87□□□□□ -2.11
CLIP1P30622 ATP5J2P3-201ENST00000451550 258 ntBASIC1.87□□□□□ -2.11
CLIP1P30622 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.87□□□□□ -2.11
CLIP1P30622 CYCSP26-201ENST00000534107 320 ntBASIC1.87□□□□□ -2.11
CLIP1P30622 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CLIP1P30622 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLIP1P30622 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.86□□□□□ -2.11
CLIP1P30622 RPL21P66-201ENST00000426566 466 ntBASIC1.86□□□□□ -2.11
CLIP1P30622 RPL35AP22-201ENST00000436855 335 ntBASIC1.86□□□□□ -2.11
CLIP1P30622 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.86□□□□□ -2.11
CLIP1P30622 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.86□□□□□ -2.11
CLIP1P30622 AL161912.3-201ENST00000605404 628 ntBASIC1.86□□□□□ -2.11
CLIP1P30622 AC020658.4-201ENST00000613987 684 ntBASIC1.86□□□□□ -2.11
CLIP1P30622 RNU1-62P-201ENST00000362599 164 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 SNORD114-27-201ENST00000363766 70 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.85□□□□□ -2.11
CLIP1P30622 AC016769.3-201ENST00000396562 315 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 AL035407.2-201ENST00000454090 378 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 AC107398.1-201ENST00000486904 505 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 AC092902.1-201ENST00000486999 259 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLIP1P30622 MIR449C-201ENST00000516047 92 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CLIP1P30622 AC008749.1-201ENST00000597650 306 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 uc_338.9-201ENST00000617424 182 ntBASIC1.85□□□□□ -2.11
CLIP1P30622 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.84□□□□□ -2.11
CLIP1P30622 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 AC017099.1-201ENST00000448261 1028 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 MTCO3P35-201ENST00000485582 781 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLIP1P30622 IGKV2D-36-201ENST00000518643 226 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 AP005597.4-201ENST00000526762 229 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 AC016957.1-201ENST00000534895 309 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.84□□□□□ -2.11
CLIP1P30622 GLUD1P4-201ENST00000590914 418 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 AP003117.1-201ENST00000602771 554 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.84□□□□□ -2.11
CLIP1P30622 MIR6515-201ENST00000619843 57 ntBASIC1.84□□□□□ -2.11
CLIP1P30622 RNU4-7P-201ENST00000364758 141 ntBASIC1.83□□□□□ -2.12
CLIP1P30622 SNORD56-201ENST00000413522 71 ntBASIC1.83□□□□□ -2.12
CLIP1P30622 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.83□□□□□ -2.12
CLIP1P30622 AL627224.1-201ENST00000448334 444 ntBASIC1.83□□□□□ -2.12
CLIP1P30622 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.83□□□□□ -2.12
CLIP1P30622 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.83□□□□□ -2.12
CLIP1P30622 AC104685.1-201ENST00000502445 371 ntBASIC1.83□□□□□ -2.12
CLIP1P30622 MIR4658-201ENST00000584344 65 ntBASIC1.83□□□□□ -2.12
CLIP1P30622 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.83□□□□□ -2.12
CLIP1P30622 AC002487.1-201ENST00000604565 994 ntBASIC1.83□□□□□ -2.12
CLIP1P30622 AC106791.2-201ENST00000604680 391 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms