Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 YWHAZP8-201ENST00000436935 731 ntBASIC5.46□□□□□ -1.54
RXRBP28702 AC005297.2-201ENST00000450430 606 ntBASIC5.46□□□□□ -1.54
RXRBP28702 RPS24P6-201ENST00000452670 400 ntBASIC5.46□□□□□ -1.54
RXRBP28702 AL162395.1-201ENST00000457882 422 ntBASIC5.46□□□□□ -1.54
RXRBP28702 AC005912.1-201ENST00000495392 255 ntBASIC5.46□□□□□ -1.54
RXRBP28702 TRBVA-201ENST00000498804 316 ntBASIC5.46□□□□□ -1.54
RXRBP28702 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.46□□□□□ -1.54
RXRBP28702 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.46□□□□□ -1.54
RXRBP28702 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.46□□□□□ -1.54
RXRBP28702 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RXRBP28702 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RXRBP28702 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.46□□□□□ -1.54
RXRBP28702 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RXRBP28702 MTND5P30-201ENST00000452896 1731 ntBASIC5.45□□□□□ -1.54
RXRBP28702 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RXRBP28702 AL022322.2-201ENST00000624072 20397 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RXRBP28702 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RXRBP28702 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RXRBP28702 AL161781.1-201ENST00000354277 403 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RNU5E-8P-201ENST00000363502 116 ntBASIC5.45□□□□□ -1.54
RXRBP28702 Y_RNA.153-201ENST00000363615 91 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RNU6-310P-201ENST00000384655 107 ntBASIC5.45□□□□□ -1.54
RXRBP28702 Y_RNA.574-201ENST00000384766 95 ntBASIC5.45□□□□□ -1.54
RXRBP28702 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RXRBP28702 AL356421.1-201ENST00000403255 413 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.45□□□□□ -1.54
RXRBP28702 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.45□□□□□ -1.54
RXRBP28702 RPL12P25-201ENST00000455592 494 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RPL23AP41-201ENST00000484754 458 ntBASIC5.45□□□□□ -1.54
RXRBP28702 TXNP6-201ENST00000510190 310 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RNU6-388P-201ENST00000517012 105 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RNU6-389P-201ENST00000517048 105 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RNU6-1213P-201ENST00000517075 94 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RNA5SP454-201ENST00000517231 127 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AP002404.1-201ENST00000532005 451 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.45□□□□□ -1.54
RXRBP28702 SULT1C2P2-201ENST00000562517 294 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.45□□□□□ -1.54
RXRBP28702 MIR4790-201ENST00000577799 79 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AC233702.9-201ENST00000581528 203 ntBASIC5.45□□□□□ -1.54
RXRBP28702 MIR5690-201ENST00000583739 73 ntBASIC5.45□□□□□ -1.54
RXRBP28702 MIR3672-201ENST00000584290 82 ntBASIC5.45□□□□□ -1.54
RXRBP28702 HSPE1P14-201ENST00000605812 302 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AC103710.2-201ENST00000609912 942 ntBASIC5.45□□□□□ -1.54
RXRBP28702 AL157817.1-201ENST00000614264 790 ntBASIC5.45□□□□□ -1.54
RXRBP28702 MIR6715A-201ENST00000615929 79 ntBASIC5.45□□□□□ -1.54
RXRBP28702 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.45□□□□□ -1.54
RXRBP28702 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
RXRBP28702 MTND5P28-201ENST00000438005 1594 ntBASIC5.45□□□□□ -1.54
RXRBP28702 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RXRBP28702 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RXRBP28702 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
RXRBP28702 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RXRBP28702 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RXRBP28702 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RXRBP28702 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RXRBP28702 RNU6-1040P-201ENST00000383974 107 ntBASIC5.44□□□□□ -1.54
RXRBP28702 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.44□□□□□ -1.54
RXRBP28702 Y_RNA.646-201ENST00000410980 101 ntBASIC5.44□□□□□ -1.54
RXRBP28702 VDAC1P9-201ENST00000412766 841 ntBASIC5.44□□□□□ -1.54
RXRBP28702 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.44□□□□□ -1.54
RXRBP28702 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.44□□□□□ -1.54
RXRBP28702 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.44□□□□□ -1.54
RXRBP28702 TIMM9P1-201ENST00000436122 256 ntBASIC5.44□□□□□ -1.54
RXRBP28702 RPL23AP74-201ENST00000437246 471 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.44□□□□□ -1.54
RXRBP28702 AF228730.2-201ENST00000438784 848 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AP000893.1-201ENST00000474462 794 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC126389.1-201ENST00000477436 290 ntBASIC5.44□□□□□ -1.54
RXRBP28702 RPS29P19-201ENST00000479709 171 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC012158.1-204ENST00000483430 465 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.44□□□□□ -1.54
RXRBP28702 Y_RNA.668-201ENST00000516233 93 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC018442.3-201ENST00000523025 183 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AP003497.1-201ENST00000528472 562 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC128657.1-201ENST00000549459 145 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.44□□□□□ -1.54
RXRBP28702 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.44□□□□□ -1.54
RXRBP28702 MIR5583-1-201ENST00000580941 59 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.44□□□□□ -1.54
RXRBP28702 OR6R2P-201ENST00000609216 300 ntBASIC5.44□□□□□ -1.54
RXRBP28702 MIR6868-201ENST00000611215 58 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.44□□□□□ -1.54
RXRBP28702 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
RXRBP28702 TAB3P1-202ENST00000452645 1634 ntBASIC5.44□□□□□ -1.54
RXRBP28702 AC121333.1-201ENST00000567488 2709 ntBASIC5.44□□□□□ -1.54
RXRBP28702 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.44□□□□□ -1.54
RXRBP28702 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.43□□□□□ -1.54
RXRBP28702 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RXRBP28702 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RXRBP28702 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.43□□□□□ -1.54
RXRBP28702 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RXRBP28702 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RXRBP28702 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RXRBP28702 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.43□□□□□ -1.54
RXRBP28702 AP000542.2-201ENST00000623199 6179 ntBASIC5.43□□□□□ -1.54
RXRBP28702 HSPE1P11-201ENST00000339579 310 ntBASIC5.43□□□□□ -1.54
RXRBP28702 RNU6-1252P-201ENST00000363054 104 ntBASIC5.43□□□□□ -1.54
RXRBP28702 Y_RNA.257-201ENST00000364596 102 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms