Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DMAP28067 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DMAP28067 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DMAP28067 AL035411.2-201ENST00000604022 421 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 BNIP3P31-201ENST00000604515 566 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AC112220.2-201ENST00000605513 533 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DMAP28067 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 DUXAP10-204ENST00000612052 616 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AC123767.1-202ENST00000620407 817 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AL138955.1-201ENST00000622881 1040 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AP003476.1-201ENST00000623984 516 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AC099654.8-201ENST00000637757 681 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DMAP28067 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DMAP28067 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DMAP28067 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DMAP28067 DDX10P1-201ENST00000448545 1933 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AC007785.2-201ENST00000598627 1916 ntBASIC2.11□□□□□ -2.07
HLA-DMAP28067 AC005832.2-201ENST00000538921 1430 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 SNORA71.3-201ENST00000362582 128 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 RNU6-343P-201ENST00000364709 104 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DMAP28067 MIR325-201ENST00000385260 98 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 SNORA48.7-201ENST00000391302 135 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 UBA52P6-201ENST00000399822 382 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AL355143.1-201ENST00000407101 841 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 RN7SKP27-201ENST00000410684 333 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 HMGB1P49-201ENST00000418882 569 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 AL512649.1-201ENST00000428997 581 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 THAP5P1-201ENST00000439089 262 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 PGBD4P3-201ENST00000440731 581 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 MTCYBP11-201ENST00000447254 1109 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 OFD1P3Y-201ENST00000453312 783 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 SUMO2P6-201ENST00000505273 288 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC114786.4-201ENST00000508771 728 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC017037.2-201ENST00000513850 890 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC114797.1-201ENST00000514003 728 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC112206.4-201ENST00000515142 405 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 RNU6-276P-201ENST00000516114 96 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 RNA5SP341-201ENST00000516261 117 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC091163.3-201ENST00000518269 1144 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DMAP28067 AP000889.2-201ENST00000532684 490 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC079600.2-201ENST00000550076 130 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC124947.2-202ENST00000552735 133 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC087465.1-201ENST00000560574 245 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 MIR4637-201ENST00000582405 84 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 VN1R83P-201ENST00000595685 445 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AC069304.2-201ENST00000605154 435 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 OR10AB1P-201ENST00000609613 938 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
HLA-DMAP28067 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DMAP28067 MTND5P1-201ENST00000445440 1375 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
HLA-DMAP28067 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DMAP28067 MIR23B-201ENST00000384832 97 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 RPS3AP24-201ENST00000407896 734 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 MRPS36P1-201ENST00000421291 307 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC019178.2-201ENST00000423595 505 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 USP12PX-201ENST00000432383 1057 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 USP9YP22-201ENST00000438971 294 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC104978.1-201ENST00000449387 391 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 ANKRD26P4-201ENST00000455755 950 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 SUMO2P2-201ENST00000456482 255 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 BX510359.1-201ENST00000456973 237 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC097493.1-201ENST00000463958 372 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AL358832.1-201ENST00000497800 389 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 GZMAP1-201ENST00000503054 631 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC103783.1-201ENST00000520506 373 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC025755.1-201ENST00000521306 278 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AP002748.2-201ENST00000528671 348 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC243972.3-201ENST00000539655 198 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC022080.3-201ENST00000544433 482 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 HIGD1AP17-201ENST00000554576 276 ntBASIC2.09□□□□□ -2.07
HLA-DMAP28067 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DMAP28067 HSPE1P3-201ENST00000559254 309 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms