Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RPL32P33-201ENST00000487023 394 ntBASIC5.55□□□□□ -1.52
VARSP26640 DUTP1-201ENST00000493631 470 ntBASIC5.55□□□□□ -1.52
VARSP26640 BX510359.5-201ENST00000515651 304 ntBASIC5.55□□□□□ -1.52
VARSP26640 RNY3P16-201ENST00000516338 101 ntBASIC5.55□□□□□ -1.52
VARSP26640 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.55□□□□□ -1.52
VARSP26640 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VARSP26640 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VARSP26640 HMGN2P36-201ENST00000529541 409 ntBASIC5.55□□□□□ -1.52
VARSP26640 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.55□□□□□ -1.52
VARSP26640 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.55□□□□□ -1.52
VARSP26640 TRAV37-201ENST00000553906 342 ntBASIC5.55□□□□□ -1.52
VARSP26640 EDDM3DP-201ENST00000554692 434 ntBASIC5.55□□□□□ -1.52
VARSP26640 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.55□□□□□ -1.52
VARSP26640 AC096996.1-201ENST00000563813 325 ntBASIC5.55□□□□□ -1.52
VARSP26640 MIR4260-201ENST00000583107 67 ntBASIC5.55□□□□□ -1.52
VARSP26640 RPL23AP78-201ENST00000599928 470 ntBASIC5.55□□□□□ -1.52
VARSP26640 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VARSP26640 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.55□□□□□ -1.52
VARSP26640 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VARSP26640 PCAT14-202ENST00000627127 3935 ntBASIC5.55□□□□□ -1.52
VARSP26640 AC026523.2-201ENST00000625039 7739 ntBASIC5.55□□□□□ -1.52
VARSP26640 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.55□□□□□ -1.52
VARSP26640 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VARSP26640 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.54□□□□□ -1.52
VARSP26640 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARSP26640 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARSP26640 AC093535.2-201ENST00000624769 2326 ntBASIC5.54□□□□□ -1.52
VARSP26640 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.54□□□□□ -1.52
VARSP26640 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VARSP26640 RNA5SP132-201ENST00000364725 118 ntBASIC5.54□□□□□ -1.52
VARSP26640 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VARSP26640 SNORD56-201ENST00000413522 71 ntBASIC5.54□□□□□ -1.52
VARSP26640 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.54□□□□□ -1.52
VARSP26640 RPS27P18-201ENST00000431701 247 ntBASIC5.54□□□□□ -1.52
VARSP26640 MTCO1P5-201ENST00000433573 344 ntBASIC5.54□□□□□ -1.52
VARSP26640 PTMAP3-201ENST00000447474 330 ntBASIC5.54□□□□□ -1.52
VARSP26640 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.54□□□□□ -1.52
VARSP26640 RN7SL188P-201ENST00000469842 285 ntBASIC5.54□□□□□ -1.52
VARSP26640 RN7SL184P-201ENST00000488308 297 ntBASIC5.54□□□□□ -1.52
VARSP26640 AC140059.1-201ENST00000489238 361 ntBASIC5.54□□□□□ -1.52
VARSP26640 AC008489.1-201ENST00000524271 483 ntBASIC5.54□□□□□ -1.52
VARSP26640 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.54□□□□□ -1.52
VARSP26640 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.54□□□□□ -1.52
VARSP26640 AC103996.1-201ENST00000555468 102 ntBASIC5.54□□□□□ -1.52
VARSP26640 MIR4282-201ENST00000583613 67 ntBASIC5.54□□□□□ -1.52
VARSP26640 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.54□□□□□ -1.52
VARSP26640 AP000787.2-201ENST00000604432 568 ntBASIC5.54□□□□□ -1.52
VARSP26640 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VARSP26640 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.54□□□□□ -1.52
VARSP26640 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VARSP26640 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VARSP26640 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARSP26640 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VARSP26640 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.53□□□□□ -1.52
VARSP26640 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 Y_RNA.275-201ENST00000364726 110 ntBASIC5.53□□□□□ -1.52
VARSP26640 Y_RNA.286-201ENST00000364813 102 ntBASIC5.53□□□□□ -1.52
VARSP26640 SNORD116-18-201ENST00000383961 92 ntBASIC5.53□□□□□ -1.52
VARSP26640 Y_RNA.569-201ENST00000384749 103 ntBASIC5.53□□□□□ -1.52
VARSP26640 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VARSP26640 MIR1178-201ENST00000408396 91 ntBASIC5.53□□□□□ -1.52
VARSP26640 RNA5SP296-201ENST00000410523 111 ntBASIC5.53□□□□□ -1.52
VARSP26640 AL133482.1-201ENST00000415988 498 ntBASIC5.53□□□□□ -1.52
VARSP26640 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.53□□□□□ -1.52
VARSP26640 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 RPL21P40-201ENST00000428586 483 ntBASIC5.53□□□□□ -1.52
VARSP26640 AC016712.1-201ENST00000431088 378 ntBASIC5.53□□□□□ -1.52
VARSP26640 HIGD1AP2-201ENST00000446367 280 ntBASIC5.53□□□□□ -1.52
VARSP26640 RPL37P6-202ENST00000464216 403 ntBASIC5.53□□□□□ -1.52
VARSP26640 RN7SL466P-201ENST00000497546 295 ntBASIC5.53□□□□□ -1.52
VARSP26640 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.53□□□□□ -1.52
VARSP26640 RNU6-612P-201ENST00000516909 102 ntBASIC5.53□□□□□ -1.52
VARSP26640 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.53□□□□□ -1.52
VARSP26640 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 AC022790.1-201ENST00000522872 204 ntBASIC5.53□□□□□ -1.52
VARSP26640 AC093591.2-201ENST00000565254 3843 ntBASIC5.53□□□□□ -1.52
VARSP26640 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.53□□□□□ -1.52
VARSP26640 SNORD113-5-201ENST00000607261 78 ntBASIC5.53□□□□□ -1.52
VARSP26640 MIR4275-201ENST00000636486 87 ntBASIC5.53□□□□□ -1.52
VARSP26640 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.53□□□□□ -1.52
VARSP26640 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
VARSP26640 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VARSP26640 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VARSP26640 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 AC139769.1-204ENST00000472297 1931 ntBASIC5.52□□□□□ -1.53
VARSP26640 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.52□□□□□ -1.53
VARSP26640 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARSP26640 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VARSP26640 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
VARSP26640 AC073136.1-201ENST00000449426 2884 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms