Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC079395.1-201ENST00000510981 262 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC023050.2-201ENST00000544968 387 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A1P20908 ZNF192P1-203ENST00000565888 810 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 MIR4666A-201ENST00000580160 79 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC004223.2-201ENST00000590309 544 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC008751.2-201ENST00000597885 980 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A1P20908 MTND3P19-201ENST00000603825 345 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AP000787.2-201ENST00000604432 568 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AP003973.1-201ENST00000604639 691 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 DPRXP5-201ENST00000604662 539 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL391813.2-201ENST00000609113 322 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AL592148.2-201ENST00000612210 372 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC107075.1-201ENST00000613695 314 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC091304.6-201ENST00000619761 202 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 AC103706.2-201ENST00000638080 240 ntBASIC2.05□□□□□ -2.08
COL5A1P20908 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL5A1P20908 AP005901.5-201ENST00000545779 1796 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL5A1P20908 AL139276.1-201ENST00000311910 1001 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL5A1P20908 MIR337-201ENST00000362281 93 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 Y_RNA.169-201ENST00000363745 96 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 RNU6-452P-201ENST00000384406 107 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 RPL31P52-201ENST00000407532 367 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.04□□□□□ -2.08
COL5A1P20908 RNA5SP181-201ENST00000410246 98 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 Z75741.2-201ENST00000417272 1167 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC007435.1-201ENST00000421086 415 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 RPL7P46-201ENST00000425129 740 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.04□□□□□ -2.08
COL5A1P20908 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 MTND3P7-201ENST00000474435 343 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 BET1P1-201ENST00000482276 359 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC068781.1-201ENST00000488231 618 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC048346.1-201ENST00000510247 144 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.04□□□□□ -2.08
COL5A1P20908 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 AP003461.1-201ENST00000528866 78 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A1P20908 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 AL132657.2-201ENST00000564417 358 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 BPTFP1-201ENST00000579209 492 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC022662.1-201ENST00000580252 331 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC040904.1-201ENST00000590850 223 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 VN1R88P-201ENST00000596787 292 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AL359821.1-201ENST00000605519 182 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC131159.1-201ENST00000621854 213 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 AC139792.2-201ENST00000624218 587 ntBASIC2.04□□□□□ -2.08
COL5A1P20908 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL5A1P20908 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A1P20908 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
COL5A1P20908 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.04□□□□□ -2.08
COL5A1P20908 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL5A1P20908 MTND4P34-201ENST00000572715 1371 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A1P20908 RNU6-543P-201ENST00000362576 108 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 Y_RNA.311-201ENST00000365068 96 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 SNORD116-8-201ENST00000384365 95 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 RNU6-549P-201ENST00000384433 107 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL5A1P20908 RNA5SP270-201ENST00000411361 118 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.03□□□□□ -2.08
COL5A1P20908 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.03□□□□□ -2.08
COL5A1P20908 AC104332.2-201ENST00000429959 156 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AC109583.1-201ENST00000432156 268 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.03□□□□□ -2.08
COL5A1P20908 NDUFB4P6-201ENST00000436819 366 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 UBE2D3P4-201ENST00000441973 436 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A1P20908 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.03□□□□□ -2.08
COL5A1P20908 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.03□□□□□ -2.08
COL5A1P20908 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.03□□□□□ -2.08
COL5A1P20908 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A1P20908 AC005840.1-201ENST00000498412 377 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.03□□□□□ -2.08
COL5A1P20908 AC008885.2-201ENST00000509506 930 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 HSPE1P23-201ENST00000509838 286 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 MTCO3P28-201ENST00000513351 515 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 RN7SKP96-201ENST00000516948 297 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 SNORA31.26-201ENST00000517250 137 ntBASIC2.03□□□□□ -2.08
COL5A1P20908 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A1P20908 AC109446.2-201ENST00000567872 497 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms