Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.25□□□□□ -1.57
LMNB1P20700 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.25□□□□□ -1.57
LMNB1P20700 SAGE2P-201ENST00000420011 2126 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AL138785.1-201ENST00000425821 331 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.25□□□□□ -1.57
LMNB1P20700 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.25□□□□□ -1.57
LMNB1P20700 Y_RNA.635-201ENST00000459041 101 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 ST13P14-201ENST00000474095 734 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.25□□□□□ -1.57
LMNB1P20700 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.25□□□□□ -1.57
LMNB1P20700 RBBP4P6-201ENST00000508098 202 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AC110768.1-201ENST00000509222 400 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AC108078.2-201ENST00000510750 236 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 RNA5SP360-201ENST00000516555 118 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 RN7SKP82-201ENST00000516786 223 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 Y_RNA.711-201ENST00000516993 102 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 SNORA70.24-201ENST00000517233 118 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.25□□□□□ -1.57
LMNB1P20700 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.25□□□□□ -1.57
LMNB1P20700 APOOP3-201ENST00000536787 586 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.25□□□□□ -1.57
LMNB1P20700 AL080274.1-201ENST00000605565 220 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AL021997.2-201ENST00000615674 271 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AL357559.1-201ENST00000622228 274 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.25□□□□□ -1.57
LMNB1P20700 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LMNB1P20700 AC121333.1-201ENST00000567488 2709 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMNB1P20700 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMNB1P20700 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.25□□□□□ -1.57
LMNB1P20700 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.25□□□□□ -1.57
LMNB1P20700 AC016588.2-201ENST00000632484 3021 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.25□□□□□ -1.57
LMNB1P20700 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.24□□□□□ -1.57
LMNB1P20700 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 PABPC1P7-201ENST00000413177 1513 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LMNB1P20700 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.24□□□□□ -1.57
LMNB1P20700 AL139811.1-201ENST00000424779 2299 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LMNB1P20700 RNU6-550P-201ENST00000391057 101 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC245054.2-201ENST00000415639 319 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 ARL5AP1-201ENST00000418991 388 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 MTCO2P27-201ENST00000420740 428 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AL391219.1-201ENST00000422570 483 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
LMNB1P20700 RPL36AP6-201ENST00000435770 321 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC005019.1-201ENST00000436455 431 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.24□□□□□ -1.57
LMNB1P20700 RNU7-152P-201ENST00000458982 64 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 Y_RNA.631-201ENST00000459607 101 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC004801.2-202ENST00000463559 283 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 TRBVA-201ENST00000498804 316 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.24□□□□□ -1.57
LMNB1P20700 RNA5SP73-201ENST00000516744 108 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC090136.1-201ENST00000520009 240 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 DEFB109D-201ENST00000529497 240 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.24□□□□□ -1.57
LMNB1P20700 PTP4A1P6-201ENST00000531034 478 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.24□□□□□ -1.57
LMNB1P20700 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.24□□□□□ -1.57
LMNB1P20700 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.24□□□□□ -1.57
LMNB1P20700 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.24□□□□□ -1.57
LMNB1P20700 AC233702.9-201ENST00000581528 203 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC067852.4-201ENST00000590314 478 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AC004696.1-201ENST00000614345 607 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 MIR6500-201ENST00000622700 86 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.24□□□□□ -1.57
LMNB1P20700 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LMNB1P20700 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 SCN1A-220ENST00000641603 12506 ntBASIC5.24□□□□□ -1.57
LMNB1P20700 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LMNB1P20700 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
LMNB1P20700 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMNB1P20700 MAPK10-320ENST00000641462 6696 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
LMNB1P20700 RNU6-1287P-201ENST00000362914 107 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 SMIM11P1-201ENST00000369586 178 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 RNU6-1060P-201ENST00000384664 107 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 RNU6-821P-201ENST00000390995 107 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 RPL21P24-201ENST00000413752 448 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.23□□□□□ -1.57
LMNB1P20700 BEND7P1-201ENST00000422058 457 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 RPL35AP22-201ENST00000436855 335 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.23□□□□□ -1.57
LMNB1P20700 PPIAP3-201ENST00000450588 505 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 SNORD97-201ENST00000459187 142 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 COPS8P3-201ENST00000526024 482 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 AP000763.2-201ENST00000540641 163 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 MIR3672-201ENST00000584290 82 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LMNB1P20700 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.23□□□□□ -1.57
LMNB1P20700 AL669831.4-202ENST00000590817 238 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 uc_338.11-201ENST00000619132 160 ntBASIC5.23□□□□□ -1.57
LMNB1P20700 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms