Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC2P18074 RNU5F-6P-201ENST00000362979 116 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RNU6-553P-201ENST00000364047 96 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RNU6-278P-201ENST00000390945 109 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RNU6-920P-201ENST00000410926 92 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.21□□□□□ -1.9
ERCC2P18074 AC012498.1-201ENST00000424037 437 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 TRIAP1P1-201ENST00000427062 225 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC007919.1-201ENST00000429380 217 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 USP12PX-201ENST00000432383 1057 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC005094.1-201ENST00000440420 368 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC118469.1-201ENST00000442943 488 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 MTATP6P30-201ENST00000443540 664 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC125238.1-201ENST00000448842 249 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC104472.2-201ENST00000469035 601 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RN7SL504P-201ENST00000494496 287 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC2P18074 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 MTND4LP22-201ENST00000508209 276 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 MTND1P22-201ENST00000510572 951 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AF131216.2-201ENST00000512316 564 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RNU6-1282P-201ENST00000516735 96 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC2P18074 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 DEFB108A-201ENST00000530110 222 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 AC007115.1-201ENST00000546853 234 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC123904.2-201ENST00000548059 300 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC2P18074 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.21□□□□□ -1.9
ERCC2P18074 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.21□□□□□ -1.9
ERCC2P18074 AL391813.2-201ENST00000609113 322 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC245517.5-201ENST00000611529 162 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC2P18074 AC122133.1-201ENST00000613964 233 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 AC026422.1-201ENST00000623961 452 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ERCC2P18074 AC233263.6-201ENST00000631132 1963 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 MTND5P1-201ENST00000445440 1375 ntBASIC3.21□□□□□ -1.9
ERCC2P18074 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ERCC2P18074 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ERCC2P18074 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC2P18074 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC2P18074 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC2P18074 RNU6-741P-201ENST00000383889 107 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 SNORD15B-201ENST00000384714 146 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 MTCYBP36-201ENST00000404146 440 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 RPL7P25-201ENST00000404151 721 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC2P18074 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC2P18074 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC2P18074 PIGFP3-201ENST00000441918 722 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 BX510359.1-201ENST00000456973 237 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 snoU13.28-201ENST00000459235 104 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 SETP11-201ENST00000473027 690 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 KC877373.1-201ENST00000479066 408 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC2P18074 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC2P18074 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.2□□□□□ -1.9
ERCC2P18074 AC098862.1-201ENST00000504991 413 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 OR5BM1P-201ENST00000512021 366 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
ERCC2P18074 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC2P18074 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 MIR5004-201ENST00000579078 107 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 MIR4293-201ENST00000584305 78 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 WISP1-OT1-201ENST00000602893 642 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 YPEL5P2-201ENST00000605553 359 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AC108747.1-201ENST00000609508 535 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AC103710.1-201ENST00000610003 901 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC2P18074 AC009159.1-201ENST00000618386 642 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AC099506.2-201ENST00000623074 221 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AP003485.2-201ENST00000623636 610 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AF246928.1-201ENST00000623768 87 ntBASIC3.2□□□□□ -1.9
ERCC2P18074 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC2P18074 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
ERCC2P18074 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.2□□□□□ -1.9
ERCC2P18074 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC2P18074 FAM35BP-202ENST00000497389 3337 ntBASIC3.19□□□□□ -1.9
ERCC2P18074 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
ERCC2P18074 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC2P18074 CD24P4-201ENST00000382840 243 ntBASIC3.19□□□□□ -1.9
ERCC2P18074 RNU5A-2P-201ENST00000384337 116 ntBASIC3.19□□□□□ -1.9
ERCC2P18074 RPL7P8-201ENST00000411964 730 ntBASIC3.19□□□□□ -1.9
ERCC2P18074 AC007899.1-201ENST00000412776 775 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms