Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MTND1P17-201ENST00000448961 204 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.43□□□□□ -1.7
COL6A2P12110 AC130509.1-201ENST00000464158 433 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC090096.1-201ENST00000489168 390 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.43□□□□□ -1.7
COL6A2P12110 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.43□□□□□ -1.7
COL6A2P12110 APOOP3-201ENST00000536787 586 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.43□□□□□ -1.7
COL6A2P12110 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.43□□□□□ -1.7
COL6A2P12110 IMMP1LP2-201ENST00000552954 492 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC090115.3-201ENST00000553218 849 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 BNIP3P5-201ENST00000562290 498 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC007151.1-201ENST00000572774 483 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.43□□□□□ -1.7
COL6A2P12110 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 AC067852.3-201ENST00000589177 561 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL670379.10-201ENST00000604330 253 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC080078.3-201ENST00000605407 463 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL670379.9-201ENST00000605428 253 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL627309.6-201ENST00000606857 840 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC020634.1-201ENST00000608701 549 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL359547.2-201ENST00000615810 418 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC100827.5-201ENST00000615883 426 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 AL445363.3-201ENST00000623080 671 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
COL6A2P12110 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 AC025031.4-201ENST00000621248 3271 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL6A2P12110 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL6A2P12110 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL6A2P12110 MFSD8-242ENST00000641690 4199 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL6A2P12110 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL6A2P12110 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL6A2P12110 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 Y_RNA.135-201ENST00000363439 95 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 Y_RNA.187-201ENST00000363918 113 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 SNORD116-11-201ENST00000383882 92 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RNU6-14P-201ENST00000384630 106 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 SNORD70.1-201ENST00000391007 85 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RPL7AP73-201ENST00000413490 353 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 SSXP9-201ENST00000417503 292 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.42□□□□□ -1.7
COL6A2P12110 Z82205.1-201ENST00000428456 297 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AL049745.1-201ENST00000433953 286 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AL353748.1-201ENST00000440753 474 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AC104058.1-201ENST00000448028 297 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 HMGB3P22-202ENST00000451823 572 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.42□□□□□ -1.7
COL6A2P12110 AP000926.1-201ENST00000479573 241 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.42□□□□□ -1.7
COL6A2P12110 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 AP001086.1-201ENST00000494882 321 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.42□□□□□ -1.7
COL6A2P12110 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.42□□□□□ -1.7
COL6A2P12110 AC079140.5-201ENST00000507882 310 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RN7SKP24-201ENST00000515888 284 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 SNORA31.3-201ENST00000516029 96 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RNU6-390P-201ENST00000516259 103 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RN7SKP258-201ENST00000517151 304 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.42□□□□□ -1.7
COL6A2P12110 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 AC106782.4-201ENST00000568264 210 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RPL23AP84-201ENST00000571193 464 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 MIR4790-201ENST00000577799 79 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 MIR3934-201ENST00000579806 107 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 MIR4737-201ENST00000583979 81 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 AC006504.6-201ENST00000590142 199 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AL670379.4-201ENST00000605279 254 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 RNA5SP108-201ENST00000605921 117 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AC116312.1-201ENST00000606841 314 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AL355802.3-201ENST00000607571 545 ntBASIC4.42□□□□□ -1.7
COL6A2P12110 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL6A2P12110 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.42□□□□□ -1.7
COL6A2P12110 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.42□□□□□ -1.7
COL6A2P12110 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL6A2P12110 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL6A2P12110 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.41□□□□□ -1.7
COL6A2P12110 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms