Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNRPA1P09661 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNRPA1P09661 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
SNRPA1P09661 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.44□□□□□ -1.7
SNRPA1P09661 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SNRPA1P09661 RNU6-1322P-201ENST00000364309 107 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RNU6-169P-201ENST00000365336 107 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 U3.20-201ENST00000390909 217 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RNU6-908P-201ENST00000410160 94 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RPS12P23-201ENST00000419579 400 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.44□□□□□ -1.7
SNRPA1P09661 RPL23AP30-201ENST00000432419 501 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 MRPS18BP2-201ENST00000434310 759 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC098614.3-201ENST00000438957 440 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC108734.1-201ENST00000439549 399 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 CYCSP32-201ENST00000440548 321 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AC073587.1-201ENST00000447093 876 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC115115.1-201ENST00000449927 248 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC022364.2-201ENST00000457963 554 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AP000852.1-201ENST00000472460 573 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RPL23AP41-201ENST00000484754 458 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RPL36AP51-201ENST00000487216 318 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RPL21P13-201ENST00000488305 481 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.44□□□□□ -1.7
SNRPA1P09661 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNRPA1P09661 RNA5SP337-201ENST00000517007 109 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AF235103.2-201ENST00000525753 346 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AP003497.1-201ENST00000528472 562 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 RAB11AP2-201ENST00000545905 639 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 CBX3P5-201ENST00000552017 521 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.44□□□□□ -1.7
SNRPA1P09661 MIR3146-201ENST00000580367 79 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 UBE2V2P2-201ENST00000587677 504 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AL356055.1-201ENST00000602528 446 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AC068790.3-201ENST00000602988 553 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.44□□□□□ -1.7
SNRPA1P09661 AC009161.2-201ENST00000624626 138 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 AL159972.1-201ENST00000625150 448 ntBASIC4.44□□□□□ -1.7
SNRPA1P09661 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNRPA1P09661 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNRPA1P09661 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.43□□□□□ -1.7
SNRPA1P09661 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNRPA1P09661 RNU6-1009P-201ENST00000390996 107 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 RPS4XP8-201ENST00000402039 771 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 RNU2-9P-201ENST00000410194 145 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC004552.1-201ENST00000419089 348 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AL606489.2-201ENST00000433886 234 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.43□□□□□ -1.7
SNRPA1P09661 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.43□□□□□ -1.7
SNRPA1P09661 BX276092.4-201ENST00000452056 248 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AMD1P1-201ENST00000457220 922 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 RPS26P3-201ENST00000470205 348 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC090543.2-201ENST00000483963 348 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC004057.1-201ENST00000485827 348 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.43□□□□□ -1.7
SNRPA1P09661 FCF1P8-201ENST00000510322 597 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 MTCO3P44-201ENST00000510977 541 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 RN7SKP83-201ENST00000516512 178 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 RN7SKP277-201ENST00000516895 283 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 OR4P1P-201ENST00000530808 1136 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.43□□□□□ -1.7
SNRPA1P09661 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.43□□□□□ -1.7
SNRPA1P09661 NRBF2P5-201ENST00000603087 788 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 C8orf59P2-201ENST00000603441 271 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC007566.2-201ENST00000603642 413 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC004853.1-201ENST00000604902 698 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.43□□□□□ -1.7
SNRPA1P09661 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SNRPA1P09661 YWHAEP7-203ENST00000622054 312 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNRPA1P09661 AC011460.1-201ENST00000636268 1834 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 AC018555.1-201ENST00000567548 1980 ntBASIC4.43□□□□□ -1.7
SNRPA1P09661 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SNRPA1P09661 AC032011.1-201ENST00000611703 1549 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.42□□□□□ -1.7
SNRPA1P09661 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.42□□□□□ -1.7
SNRPA1P09661 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.42□□□□□ -1.7
SNRPA1P09661 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNRPA1P09661 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNRPA1P09661 Y_RNA.61-201ENST00000362835 102 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 SNORD56.2-201ENST00000363242 71 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 SNORA38.1-201ENST00000364172 131 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 RNY1P12-201ENST00000364251 105 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SNRPA1P09661 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNRPA1P09661 U3.19-201ENST00000390893 196 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 OR51A5P-201ENST00000415429 942 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 MRPL50P2-201ENST00000416821 482 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 AC006989.1-201ENST00000427212 131 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 RPS6P12-201ENST00000432491 726 ntBASIC4.42□□□□□ -1.7
SNRPA1P09661 FTH1P1-201ENST00000437933 532 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms