Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TPM1P09493 MIR7106-201ENST00000612419 65 ntBASIC2.43□□□□□ -2.02
TPM1P09493 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
TPM1P09493 AL365361.1-201ENST00000566942 3481 ntBASIC2.43□□□□□ -2.02
TPM1P09493 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TPM1P09493 Z99496.1-201ENST00000469424 1477 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC062016.1-201ENST00000355719 319 ntBASIC2.42□□□□□ -2.02
TPM1P09493 SUGT1P1-201ENST00000379514 476 ntBASIC2.42□□□□□ -2.02
TPM1P09493 U3.40-201ENST00000408706 208 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.42□□□□□ -2.02
TPM1P09493 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.42□□□□□ -2.02
TPM1P09493 PPP1R11P2-201ENST00000423543 382 ntBASIC2.42□□□□□ -2.02
TPM1P09493 FAM204CP-201ENST00000424489 642 ntBASIC2.42□□□□□ -2.02
TPM1P09493 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.42□□□□□ -2.02
TPM1P09493 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.42□□□□□ -2.02
TPM1P09493 CBWD4P-201ENST00000445695 655 ntBASIC2.42□□□□□ -2.02
TPM1P09493 RNU6-717P-201ENST00000459076 104 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC025033.1-201ENST00000463883 194 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC010460.2-201ENST00000509054 677 ntBASIC2.42□□□□□ -2.02
TPM1P09493 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.42□□□□□ -2.02
TPM1P09493 COL6A4P2-205ENST00000509855 506 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC022447.1-201ENST00000515358 464 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.42□□□□□ -2.02
TPM1P09493 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.42□□□□□ -2.02
TPM1P09493 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AP001429.1-201ENST00000602568 530 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC107294.1-201ENST00000609524 467 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC046143.2-201ENST00000609789 160 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC239803.2-201ENST00000610161 430 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC135507.2-201ENST00000612443 309 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AC009831.4-201ENST00000620744 325 ntBASIC2.42□□□□□ -2.02
TPM1P09493 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.42□□□□□ -2.02
TPM1P09493 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TPM1P09493 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.41□□□□□ -2.02
TPM1P09493 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.41□□□□□ -2.02
TPM1P09493 RNA5SP138-201ENST00000365098 114 ntBASIC2.41□□□□□ -2.02
TPM1P09493 SNORA48.3-201ENST00000391081 134 ntBASIC2.41□□□□□ -2.02
TPM1P09493 RPS15AP5-201ENST00000436276 388 ntBASIC2.41□□□□□ -2.02
TPM1P09493 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TPM1P09493 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM1P09493 AC005297.2-201ENST00000450430 606 ntBASIC2.41□□□□□ -2.02
TPM1P09493 EEF1B2P7-201ENST00000451177 676 ntBASIC2.41□□□□□ -2.02
TPM1P09493 MTATP6P7-201ENST00000453315 681 ntBASIC2.41□□□□□ -2.02
TPM1P09493 SETP6-201ENST00000479329 568 ntBASIC2.41□□□□□ -2.02
TPM1P09493 AC022493.1-201ENST00000492984 337 ntBASIC2.41□□□□□ -2.02
TPM1P09493 AC105252.1-201ENST00000503089 286 ntBASIC2.41□□□□□ -2.02
TPM1P09493 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM1P09493 AC017037.2-201ENST00000513850 890 ntBASIC2.41□□□□□ -2.02
TPM1P09493 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM1P09493 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM1P09493 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM1P09493 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.41□□□□□ -2.02
TPM1P09493 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.41□□□□□ -2.02
TPM1P09493 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPM1P09493 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM1P09493 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
TPM1P09493 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TPM1P09493 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TPM1P09493 AC005005.2-201ENST00000420779 380 ntBASIC2.4□□□□□ -2.03
TPM1P09493 NUP35P1-201ENST00000422734 947 ntBASIC2.4□□□□□ -2.03
TPM1P09493 MTCYBP32-201ENST00000427945 1084 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 AC025750.2-201ENST00000442609 450 ntBASIC2.4□□□□□ -2.03
TPM1P09493 RPS3AP12-201ENST00000443616 753 ntBASIC2.4□□□□□ -2.03
TPM1P09493 COX6CP18-201ENST00000448769 222 ntBASIC2.4□□□□□ -2.03
TPM1P09493 RN7SL636P-201ENST00000497504 294 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.4□□□□□ -2.03
TPM1P09493 AP005902.1-201ENST00000521358 186 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.4□□□□□ -2.03
TPM1P09493 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.4□□□□□ -2.03
TPM1P09493 MIR4789-201ENST00000577469 82 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM1P09493 RPAP2P1-201ENST00000603626 1168 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC098657.3-201ENST00000620434 263 ntBASIC2.4□□□□□ -2.03
TPM1P09493 AC008443.7-201ENST00000622195 246 ntBASIC2.4□□□□□ -2.03
TPM1P09493 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.4□□□□□ -2.03
TPM1P09493 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
TPM1P09493 U3.26-201ENST00000391236 204 ntBASIC2.39□□□□□ -2.03
TPM1P09493 AL355497.1-201ENST00000406262 551 ntBASIC2.39□□□□□ -2.03
TPM1P09493 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
TPM1P09493 AC023141.4-201ENST00000412031 328 ntBASIC2.39□□□□□ -2.03
TPM1P09493 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM1P09493 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.39□□□□□ -2.03
TPM1P09493 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.39□□□□□ -2.03
TPM1P09493 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
TPM1P09493 SDR42E1P3-201ENST00000438345 502 ntBASIC2.39□□□□□ -2.03
TPM1P09493 OSTCP8-201ENST00000445117 448 ntBASIC2.39□□□□□ -2.03
TPM1P09493 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.39□□□□□ -2.03
TPM1P09493 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TPM1P09493 AC026410.2-201ENST00000460281 156 ntBASIC2.39□□□□□ -2.03
TPM1P09493 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM1P09493 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.39□□□□□ -2.03
TPM1P09493 AC006518.2-201ENST00000542513 940 ntBASIC2.39□□□□□ -2.03
TPM1P09493 MTATP6P25-201ENST00000574491 261 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms