Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC078795.3-201ENST00000602913 472 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 AL359893.1-201ENST00000447628 1580 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 AC000123.3-201ENST00000624029 4975 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 RIOK3P1-201ENST00000418778 1528 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOAP06340 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOAP06340 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOAP06340 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 RNU5E-8P-201ENST00000363502 116 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 RNU6-108P-201ENST00000365558 107 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 U3.29-201ENST00000391296 212 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 PTMAP5-201ENST00000393073 333 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC073587.1-201ENST00000447093 876 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC140076.1-201ENST00000449897 361 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AL353691.1-201ENST00000451332 387 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC104308.1-201ENST00000454621 333 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC006512.1-201ENST00000468816 291 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 NIPA2P2-201ENST00000496376 1083 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC103851.1-201ENST00000506833 274 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 HIGD1AP3-201ENST00000515857 278 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 RNU7-30P-201ENST00000516835 62 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 BTF3P12-201ENST00000519620 469 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC105029.1-201ENST00000520250 669 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AP001029.3-201ENST00000588063 596 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC004853.1-201ENST00000604902 698 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 BRDTP1-201ENST00000605735 677 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AL122125.1-201ENST00000616999 600 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC090574.1-201ENST00000623186 233 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC091925.2-201ENST00000625059 256 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC005332.5-201ENST00000591222 2919 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AL445437.1-201ENST00000623157 3087 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOAP06340 AC006020.1-201ENST00000420179 1854 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 MTND5P1-201ENST00000445440 1375 ntBASIC4.26□□□□□ -1.73
HLA-DOAP06340 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DOAP06340 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DOAP06340 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC011978.2-201ENST00000569835 2054 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOAP06340 Y_RNA.67-201ENST00000362870 100 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 RNU6-606P-201ENST00000384721 111 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 RNVU1-14-201ENST00000384770 164 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOAP06340 RNA5SP118-201ENST00000410385 109 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 MTCYBP8-201ENST00000422855 651 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 HMGB3P21-201ENST00000452483 547 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOAP06340 HMGN1P13-201ENST00000505795 138 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC026427.2-201ENST00000506228 536 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC117522.3-201ENST00000507974 584 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 RNU6-27P-201ENST00000516146 107 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 RNU6-277P-201ENST00000516272 106 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 NARSP2-201ENST00000518524 679 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 PTP4A1P6-201ENST00000531034 478 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC007458.1-201ENST00000542812 373 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 SCOCP1-201ENST00000554676 349 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DOAP06340 HMGB1P6-201ENST00000569046 646 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AL355375.2-201ENST00000574825 175 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC005498.1-201ENST00000592125 465 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC022432.1-201ENST00000595739 310 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC013553.2-201ENST00000604244 589 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AL133255.1-201ENST00000606374 441 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 AC009248.2-201ENST00000619826 254 ntBASIC4.25□□□□□ -1.73
HLA-DOAP06340 C2orf27A-204ENST00000623058 969 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms