Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 MIR4330-201ENST00000579077 105 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 PRPF19P1-201ENST00000584766 898 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC009314.1-201ENST00000603871 304 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 MIR1244-1-201ENST00000612829 85 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC078938.1-201ENST00000620993 318 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 MIR1244-3-201ENST00000635744 85 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 MIR1244-2-201ENST00000636449 85 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 MIR1244-4-202ENST00000636813 85 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AC074101.1-201ENST00000637861 241 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.96□□□□□ -1.61
PDGFAP04085 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PDGFAP04085 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PDGFAP04085 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFAP04085 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 RNU6-384P-201ENST00000364900 104 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 RNU6-1026P-201ENST00000384465 108 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 MIR628-201ENST00000385229 95 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PDGFAP04085 RNU6-700P-201ENST00000391043 107 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 MIR1290-201ENST00000408735 78 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 FAR2P2-201ENST00000413041 594 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFAP04085 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.96□□□□□ -1.62
PDGFAP04085 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFAP04085 FABP5P15-201ENST00000453566 214 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.96□□□□□ -1.62
PDGFAP04085 RPL12P39-201ENST00000455456 496 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFAP04085 snoU13.20-201ENST00000459180 104 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFAP04085 AL160314.1-201ENST00000490836 438 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PDGFAP04085 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
PDGFAP04085 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFAP04085 AC006115.2-201ENST00000596823 202 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 RPS29P30-201ENST00000600975 111 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 AL158827.2-201ENST00000602494 330 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 AL360181.4-201ENST00000621752 134 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFAP04085 AL691447.3-201ENST00000635020 330 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
PDGFAP04085 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFAP04085 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFAP04085 AC004817.4-201ENST00000602396 3625 ntBASIC4.96□□□□□ -1.62
PDGFAP04085 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFAP04085 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PDGFAP04085 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFAP04085 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFAP04085 SAMMSON-226ENST00000642089 1582 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFAP04085 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFAP04085 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFAP04085 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFAP04085 Y_RNA.214-201ENST00000364201 112 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 Y_RNA.245-201ENST00000364493 95 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 RNU6-335P-201ENST00000364563 113 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 MIR124-3-201ENST00000384866 87 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 SNORD56-201ENST00000413522 71 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AL592148.1-201ENST00000413568 445 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 AC092017.2-201ENST00000427600 362 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AC092423.1-201ENST00000430165 186 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 AC092647.2-201ENST00000452998 253 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AL583843.1-201ENST00000456070 346 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 AC006463.2-201ENST00000473326 348 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 RPL21P13-201ENST00000488305 481 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 RNU6-911P-201ENST00000516523 104 ntBASIC4.95□□□□□ -1.62
PDGFAP04085 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFAP04085 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms