Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFP01375 AC023512.1-201ENST00000444513 499 ntBASIC1.57□□□□□ -2.16
TNFP01375 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.57□□□□□ -2.16
TNFP01375 AL034418.1-201ENST00000448675 860 ntBASIC1.57□□□□□ -2.16
TNFP01375 RPS15AP27-201ENST00000449183 343 ntBASIC1.57□□□□□ -2.16
TNFP01375 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFP01375 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.57□□□□□ -2.16
TNFP01375 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFP01375 MRPS36P2-201ENST00000512569 299 ntBASIC1.57□□□□□ -2.16
TNFP01375 AC023043.2-201ENST00000589678 1026 ntBASIC1.57□□□□□ -2.16
TNFP01375 AP001486.3-201ENST00000615334 372 ntBASIC1.57□□□□□ -2.16
TNFP01375 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.57□□□□□ -2.16
TNFP01375 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TNFP01375 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TNFP01375 UBE2L2-201ENST00000254302 429 ntBASIC1.56□□□□□ -2.16
TNFP01375 RNU6-60P-201ENST00000364792 103 ntBASIC1.56□□□□□ -2.16
TNFP01375 FGF7P8-201ENST00000402994 292 ntBASIC1.56□□□□□ -2.16
TNFP01375 HMGB3P31-201ENST00000413333 595 ntBASIC1.56□□□□□ -2.16
TNFP01375 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TNFP01375 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFP01375 AC006499.2-201ENST00000513470 337 ntBASIC1.56□□□□□ -2.16
TNFP01375 AC108729.3-201ENST00000513484 108 ntBASIC1.56□□□□□ -2.16
TNFP01375 RN7SKP31-201ENST00000516354 278 ntBASIC1.56□□□□□ -2.16
TNFP01375 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFP01375 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.56□□□□□ -2.16
TNFP01375 OR4K8P-201ENST00000578842 1048 ntBASIC1.56□□□□□ -2.16
TNFP01375 DPRXP5-201ENST00000604662 539 ntBASIC1.56□□□□□ -2.16
TNFP01375 AC025594.3-201ENST00000613068 790 ntBASIC1.56□□□□□ -2.16
TNFP01375 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
TNFP01375 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
TNFP01375 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
TNFP01375 RNU6-14P-201ENST00000384630 106 ntBASIC1.55□□□□□ -2.16
TNFP01375 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
TNFP01375 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
TNFP01375 RPS7P9-201ENST00000414704 586 ntBASIC1.55□□□□□ -2.16
TNFP01375 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.55□□□□□ -2.16
TNFP01375 SEPT2P1-201ENST00000419651 180 ntBASIC1.55□□□□□ -2.16
TNFP01375 BX510359.4-201ENST00000423750 193 ntBASIC1.55□□□□□ -2.16
TNFP01375 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 RPL35AP22-201ENST00000436855 335 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 AC087588.1-201ENST00000462203 316 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 AC105252.1-201ENST00000503089 286 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.55□□□□□ -2.16
TNFP01375 SCARNA17.1-201ENST00000516211 143 ntBASIC1.55□□□□□ -2.16
TNFP01375 SCARNA17.2-201ENST00000516334 143 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFP01375 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.55□□□□□ -2.16
TNFP01375 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC103987.3-201ENST00000582071 292 ntBASIC1.55□□□□□ -2.16
TNFP01375 AL096840.1-201ENST00000603287 93 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.55□□□□□ -2.16
TNFP01375 BX248123.2-201ENST00000606318 124 ntBASIC1.55□□□□□ -2.16
TNFP01375 AL512598.1-201ENST00000610158 273 ntBASIC1.55□□□□□ -2.16
TNFP01375 AC004852.3-201ENST00000614131 326 ntBASIC1.55□□□□□ -2.16
TNFP01375 SCARNA17.4-201ENST00000614296 143 ntBASIC1.55□□□□□ -2.16
TNFP01375 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.55□□□□□ -2.16
TNFP01375 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.55□□□□□ -2.16
TNFP01375 EZH2P1-201ENST00000431167 291 ntBASIC1.54□□□□□ -2.16
TNFP01375 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFP01375 AL136380.1-201ENST00000447970 162 ntBASIC1.54□□□□□ -2.16
TNFP01375 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.54□□□□□ -2.16
TNFP01375 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFP01375 RNF138P1-201ENST00000502765 546 ntBASIC1.54□□□□□ -2.16
TNFP01375 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFP01375 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFP01375 POLR2KP1-201ENST00000553226 168 ntBASIC1.54□□□□□ -2.16
TNFP01375 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFP01375 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
TNFP01375 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFP01375 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
TNFP01375 AL449363.1-201ENST00000617815 186 ntBASIC1.54□□□□□ -2.16
TNFP01375 AL354685.2-201ENST00000448218 1447 ntBASIC1.54□□□□□ -2.16
TNFP01375 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TNFP01375 RNU6-1074P-201ENST00000383995 104 ntBASIC1.53□□□□□ -2.16
TNFP01375 RNU6-167P-201ENST00000384292 106 ntBASIC1.53□□□□□ -2.16
TNFP01375 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFP01375 VTA1P1-201ENST00000414044 866 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.53□□□□□ -2.16
TNFP01375 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC006548.1-201ENST00000427470 102 ntBASIC1.53□□□□□ -2.16
TNFP01375 BNIP3P2-201ENST00000441221 577 ntBASIC1.53□□□□□ -2.16
TNFP01375 MTATP6P7-201ENST00000453315 681 ntBASIC1.53□□□□□ -2.16
TNFP01375 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.53□□□□□ -2.16
TNFP01375 PMCHL2-203ENST00000457791 237 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC111193.1-201ENST00000504097 155 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFP01375 AC093281.2-201ENST00000510153 597 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC008494.2-201ENST00000514544 370 ntBASIC1.53□□□□□ -2.16
TNFP01375 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.53□□□□□ -2.16
TNFP01375 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.53□□□□□ -2.16
TNFP01375 SUB1P3-201ENST00000564581 315 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC022662.1-201ENST00000580252 331 ntBASIC1.53□□□□□ -2.16
TNFP01375 AL450336.1-201ENST00000605180 586 ntBASIC1.53□□□□□ -2.16
TNFP01375 snoU13.31-201ENST00000607291 104 ntBASIC1.53□□□□□ -2.16
TNFP01375 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms