Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR3199-2-201ENST00000636243 86 ntBASIC1.32□□□□□ -2.2
ABCA1O95477 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
ABCA1O95477 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
ABCA1O95477 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ABCA1O95477 MTND5P35-201ENST00000557537 1720 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA1O95477 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 AL645638.1-201ENST00000440519 361 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 HSFY3P-201ENST00000444242 1191 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 MTND2P19-201ENST00000449129 1012 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA1O95477 AC087588.1-201ENST00000462203 316 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 TOMM22P6-201ENST00000465035 409 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AL121594.1-201ENST00000475906 575 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 MTCO2P9-201ENST00000503214 694 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 CIR1P1-201ENST00000524055 1133 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 OR4V1P-201ENST00000525394 1140 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AC023824.2-201ENST00000566185 400 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 MIR4446-201ENST00000578505 67 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.31□□□□□ -2.2
ABCA1O95477 AC135803.1-201ENST00000608748 565 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA1O95477 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 MIR6734-201ENST00000621166 68 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ABCA1O95477 RNU1-105P-201ENST00000363470 161 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 MTCYBP34-201ENST00000439552 670 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA1O95477 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA1O95477 AC007375.1-201ENST00000554513 578 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AL049838.1-201ENST00000563647 981 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AL590099.1-201ENST00000615276 138 ntBASIC1.31□□□□□ -2.2
ABCA1O95477 AC093536.2-201ENST00000565257 1406 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA1O95477 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 RNU4-52P-201ENST00000384209 138 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 RNU2-40P-201ENST00000410833 196 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 AL136133.1-201ENST00000413694 376 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.3□□□□□ -2.2
ABCA1O95477 OR10R1P-201ENST00000441524 1141 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.3□□□□□ -2.2
ABCA1O95477 AC096992.1-201ENST00000459808 709 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA1O95477 RPS15AP36-201ENST00000492022 382 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 AF131216.2-201ENST00000512316 564 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ABCA1O95477 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA1O95477 AC087272.1-201ENST00000523624 533 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.3□□□□□ -2.2
ABCA1O95477 AC098848.2-201ENST00000588023 330 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 OR4G1P-201ENST00000588632 938 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 U73023.1-201ENST00000603134 700 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 AC010738.1-201ENST00000604970 987 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 BNIP3P7-201ENST00000605641 516 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 AC022709.1-201ENST00000615967 87 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 AC068880.5-201ENST00000624331 290 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 HPVC1-201ENST00000629899 1198 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA1O95477 SGO1P2-201ENST00000429458 1589 ntBASIC1.3□□□□□ -2.2
ABCA1O95477 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 RNU6-263P-201ENST00000363811 107 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 RNU6-60P-201ENST00000364792 103 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA1O95477 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA1O95477 FO393414.1-201ENST00000428697 1184 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 MTCO3P17-201ENST00000443775 513 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC234775.1-201ENST00000454247 670 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC104689.1-201ENST00000473356 768 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC107398.1-201ENST00000486904 505 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA1O95477 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA1O95477 SNORA31.13-201ENST00000516624 135 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC067904.2-201ENST00000517322 1283 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA1O95477 BTF3P12-201ENST00000519620 469 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 MTND2P26-201ENST00000528255 1029 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA1O95477 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 RPS15AP11-201ENST00000594193 385 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 RNU6-173P-201ENST00000364215 104 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 ERHP2-201ENST00000402323 299 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 MTCO3P12-201ENST00000416718 547 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 OFD1P18Y-201ENST00000420889 959 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC114973.1-201ENST00000429057 632 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 PIGFP3-201ENST00000441918 722 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms