Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.38□□□□□ -1.87
GPC4O75487 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 VN1R34P-201ENST00000447387 883 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 LARP1BP2-201ENST00000486594 519 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GPC4O75487 AL359273.1-201ENST00000510918 627 ntBASIC3.38□□□□□ -1.87
GPC4O75487 MTCO3P28-201ENST00000513351 515 ntBASIC3.38□□□□□ -1.87
GPC4O75487 RNU1-61P-201ENST00000516107 151 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AP000873.5-201ENST00000533906 236 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC4O75487 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.38□□□□□ -1.87
GPC4O75487 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 AC055876.1-202ENST00000567053 138 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 MIR4444-1-201ENST00000581696 74 ntBASIC3.38□□□□□ -1.87
GPC4O75487 MIR4444-2-201ENST00000584390 74 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC4O75487 AC040904.1-201ENST00000590850 223 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC131902.3-201ENST00000611767 581 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC090132.2-201ENST00000615881 347 ntBASIC3.38□□□□□ -1.87
GPC4O75487 uc_338.12-201ENST00000616344 181 ntBASIC3.38□□□□□ -1.87
GPC4O75487 AC006338.1-201ENST00000618453 749 ntBASIC3.38□□□□□ -1.87
GPC4O75487 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
GPC4O75487 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
GPC4O75487 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
GPC4O75487 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
GPC4O75487 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC4O75487 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC4O75487 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC4O75487 OR1S2-201ENST00000302592 978 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RNU4-35P-201ENST00000362588 141 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RNY4P34-201ENST00000364779 95 ntBASIC3.37□□□□□ -1.87
GPC4O75487 Y_RNA.359-201ENST00000365498 102 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RNA5SP293-201ENST00000410527 113 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RNU6-195P-201ENST00000411352 109 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.37□□□□□ -1.87
GPC4O75487 AL356968.1-201ENST00000416622 474 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RPS15AP12-201ENST00000419498 388 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC245291.1-201ENST00000419501 328 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RPL27AP8-201ENST00000424277 446 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RPL23AP82-202ENST00000427528 469 ntBASIC3.37□□□□□ -1.87
GPC4O75487 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.37□□□□□ -1.87
GPC4O75487 HMGN2P31-201ENST00000432430 273 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC4O75487 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.37□□□□□ -1.87
GPC4O75487 GAPDHP17-201ENST00000449858 1001 ntBASIC3.37□□□□□ -1.87
GPC4O75487 SSXP1-201ENST00000453640 473 ntBASIC3.37□□□□□ -1.87
GPC4O75487 SNRPFP4-201ENST00000456366 242 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC108059.3-201ENST00000456388 214 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AL359385.1-201ENST00000456509 365 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC4O75487 CENPBD1P1-201ENST00000464061 469 ntBASIC3.37□□□□□ -1.87
GPC4O75487 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC4O75487 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC010587.1-201ENST00000505809 469 ntBASIC3.37□□□□□ -1.87
GPC4O75487 MTND4P2-201ENST00000507767 1203 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC079140.3-201ENST00000511111 550 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.37□□□□□ -1.87
GPC4O75487 GMPSP1-201ENST00000514075 579 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.37□□□□□ -1.87
GPC4O75487 Y_RNA.672-201ENST00000516289 104 ntBASIC3.37□□□□□ -1.87
GPC4O75487 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
GPC4O75487 RNU6-840P-201ENST00000517275 65 ntBASIC3.37□□□□□ -1.87
GPC4O75487 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
GPC4O75487 MIR3921-201ENST00000577308 85 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC098614.4-201ENST00000607601 462 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AC103710.2-201ENST00000609912 942 ntBASIC3.37□□□□□ -1.87
GPC4O75487 AP000254.1-201ENST00000609934 520 ntBASIC3.37□□□□□ -1.87
GPC4O75487 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.37□□□□□ -1.87
GPC4O75487 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC4O75487 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
GPC4O75487 MAPK10-362ENST00000641864 4484 ntBASIC3.37□□□□□ -1.87
GPC4O75487 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GPC4O75487 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
GPC4O75487 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GPC4O75487 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
GPC4O75487 GNG5P1-201ENST00000255500 204 ntBASIC3.36□□□□□ -1.87
GPC4O75487 OR5J1P-201ENST00000313544 939 ntBASIC3.36□□□□□ -1.87
GPC4O75487 RNU5E-1-201ENST00000362477 120 ntBASIC3.36□□□□□ -1.87
GPC4O75487 Y_RNA.318-201ENST00000365131 97 ntBASIC3.36□□□□□ -1.87
GPC4O75487 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
GPC4O75487 MIR449B-201ENST00000384995 97 ntBASIC3.36□□□□□ -1.87
GPC4O75487 DEFB108C-201ENST00000400154 252 ntBASIC3.36□□□□□ -1.87
GPC4O75487 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
GPC4O75487 RNA5SP31-201ENST00000411144 127 ntBASIC3.36□□□□□ -1.87
GPC4O75487 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.36□□□□□ -1.87
GPC4O75487 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.36□□□□□ -1.87
GPC4O75487 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.36□□□□□ -1.87
GPC4O75487 AC009961.2-201ENST00000435771 251 ntBASIC3.36□□□□□ -1.87
GPC4O75487 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.36□□□□□ -1.87
GPC4O75487 AC140076.1-201ENST00000449897 361 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms