Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR92B-201ENST00000607575 96 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF3O43395 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PRPF3O43395 AC007998.5-201ENST00000622938 237 ntBASIC4.25□□□□□ -1.73
PRPF3O43395 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF3O43395 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.25□□□□□ -1.73
PRPF3O43395 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF3O43395 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF3O43395 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PRPF3O43395 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF3O43395 HSPA8P1-201ENST00000425843 1833 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF3O43395 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF3O43395 RN7SKP140-201ENST00000411196 284 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 RNU6-387P-201ENST00000411331 105 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 MTCO2P11-201ENST00000431069 680 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 HMGB1P27-201ENST00000431429 603 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AL445584.1-201ENST00000431451 330 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF3O43395 USP9YP28-201ENST00000435142 589 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF3O43395 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF3O43395 AC087588.1-201ENST00000462203 316 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AC117522.1-201ENST00000509821 380 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 RNU6-506P-201ENST00000516553 94 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 NRON-201ENST00000517270 370 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF3O43395 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.24□□□□□ -1.73
PRPF3O43395 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF3O43395 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF3O43395 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.24□□□□□ -1.73
PRPF3O43395 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.24□□□□□ -1.73
PRPF3O43395 AC098848.2-201ENST00000588023 330 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF3O43395 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF3O43395 AL121772.2-201ENST00000614331 297 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 uc_338.11-201ENST00000619132 160 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AC124864.2-201ENST00000624736 186 ntBASIC4.24□□□□□ -1.73
PRPF3O43395 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRPF3O43395 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF3O43395 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF3O43395 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF3O43395 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF3O43395 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF3O43395 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF3O43395 AC022336.2-201ENST00000568966 2538 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF3O43395 RNU6-1120P-201ENST00000362988 108 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RNA5SP51-201ENST00000364750 119 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RNU6-517P-201ENST00000384362 110 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RNU6-817P-201ENST00000391083 104 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 AL590704.1-201ENST00000402856 794 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 Z98941.1-201ENST00000407764 100 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RN7SKP202-201ENST00000410439 330 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RNU2-39P-201ENST00000410604 198 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RN7SKP53-201ENST00000411337 315 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF3O43395 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF3O43395 AC007283.2-201ENST00000424739 197 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 C8orf59P1-201ENST00000429930 303 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 AC002486.1-201ENST00000435098 391 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 SNRPGP6-201ENST00000451124 220 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RNU6-953P-201ENST00000459154 107 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RPL37P6-201ENST00000460682 294 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 RPL9P6-201ENST00000492764 598 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.23□□□□□ -1.73
PRPF3O43395 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF3O43395 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF3O43395 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.23□□□□□ -1.73
PRPF3O43395 AC006130.2-201ENST00000586202 326 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 KLKP1-201ENST00000595979 403 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF3O43395 uc_338.32-201ENST00000615087 172 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
PRPF3O43395 MTND5P17-201ENST00000418405 1603 ntBASIC4.23□□□□□ -1.73
PRPF3O43395 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF3O43395 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF3O43395 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.23□□□□□ -1.73
PRPF3O43395 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 RNU6-456P-201ENST00000384493 107 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 RNU4-55P-201ENST00000410731 137 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.22□□□□□ -1.73
PRPF3O43395 RPS20P5-201ENST00000434808 360 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF3O43395 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.22□□□□□ -1.73
PRPF3O43395 DDX3P2-201ENST00000446138 111 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.22□□□□□ -1.73
PRPF3O43395 HMGN2P7-201ENST00000456186 273 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AC126389.1-201ENST00000477436 290 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.22□□□□□ -1.73
PRPF3O43395 NDUFB4P9-201ENST00000511646 388 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 NARSP2-201ENST00000518524 679 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF3O43395 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF3O43395 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.22□□□□□ -1.73
PRPF3O43395 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms