Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL118520.1-201ENST00000450770 291 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 MTND2P6-201ENST00000455337 1030 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 RPL23AP49-201ENST00000492925 468 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 RN7SKP31-201ENST00000516354 278 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 RNU6-1256P-201ENST00000516539 103 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 HMGB1P1-201ENST00000522557 636 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AP002770.2-201ENST00000543613 532 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 SNRPGP18-201ENST00000553000 214 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 AC093510.2-201ENST00000562820 896 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AC023824.3-201ENST00000569003 562 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 MIR4319-201ENST00000577285 85 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AC078899.2-201ENST00000595282 212 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 VN1R92P-201ENST00000598511 928 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGB3O15347 AC008121.1-201ENST00000603244 268 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 AC012468.1-201ENST00000604888 430 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGB3O15347 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGB3O15347 HSPA8P4-201ENST00000511877 1920 ntBASIC1.64□□□□□ -2.15
HMGB3O15347 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGB3O15347 RNA5SP125-201ENST00000364843 120 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 GSTA9P-201ENST00000406231 611 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AL450338.1-201ENST00000407987 512 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC003685.2-201ENST00000422795 395 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC018630.2-202ENST00000422992 927 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 PTP4A1P7-201ENST00000423476 514 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC093106.2-201ENST00000428212 385 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGB3O15347 RPS15AP5-201ENST00000436276 388 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 RPL35AP22-201ENST00000436855 335 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 Z82210.1-201ENST00000440037 231 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 RPS3AP12-201ENST00000443616 753 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGB3O15347 RPL32P14-201ENST00000463196 378 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGB3O15347 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGB3O15347 AC098591.2-201ENST00000510152 315 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGB3O15347 RNA5SP281-201ENST00000516504 135 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 RNU2-44P-201ENST00000516795 194 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGB3O15347 AC233266.2-201ENST00000567067 528 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC022662.1-201ENST00000580252 331 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 MIR5195-201ENST00000583555 115 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC068313.1-201ENST00000604028 1008 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGB3O15347 AC096577.2-201ENST00000611455 153 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AL589743.7-201ENST00000612637 233 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AL442067.2-201ENST00000614033 363 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 MIR6130-201ENST00000619419 109 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AP003400.5-201ENST00000624827 617 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AL354685.2-201ENST00000448218 1447 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 ZNF849P-201ENST00000594711 1566 ntBASIC1.63□□□□□ -2.15
HMGB3O15347 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGB3O15347 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMGB3O15347 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HMGB3O15347 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMGB3O15347 MIR128-1-201ENST00000384921 82 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 RNU6-796P-201ENST00000391086 107 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 RPS4XP8-201ENST00000402039 771 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC241584.1-201ENST00000438469 1241 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC107083.1-201ENST00000439643 279 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGB3O15347 PMCHL2-203ENST00000457791 237 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC080013.2-201ENST00000460866 323 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC026801.1-201ENST00000497178 464 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC112518.2-201ENST00000508565 425 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGB3O15347 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGB3O15347 AC109471.1-201ENST00000511631 612 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGB3O15347 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGB3O15347 SCARNA3-201ENST00000517097 143 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC103833.1-201ENST00000517442 172 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.62□□□□□ -2.15
HMGB3O15347 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGB3O15347 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGB3O15347 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGB3O15347 CYCSP2-201ENST00000558168 301 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 MIR3199-1-201ENST00000582434 88 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGB3O15347 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.62□□□□□ -2.15
HMGB3O15347 AL021997.1-201ENST00000605757 193 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AL445493.3-201ENST00000619568 477 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC073592.7-201ENST00000623659 507 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGB3O15347 MIR7157-201ENST00000635801 60 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 AC004520.1-201ENST00000608362 1413 ntBASIC1.62□□□□□ -2.15
HMGB3O15347 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMGB3O15347 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HMGB3O15347 SNORA36C-201ENST00000384289 132 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGB3O15347 SNORA11B-201ENST00000408175 129 ntBASIC1.61□□□□□ -2.15
HMGB3O15347 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms