Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PSMA6P3-201ENST00000428242 164 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AC236972.1-201ENST00000433225 199 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.65□□□□□ -2.15
SDCBPO00560 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.65□□□□□ -2.15
SDCBPO00560 RFC5P1-201ENST00000454419 874 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.65□□□□□ -2.15
SDCBPO00560 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.65□□□□□ -2.15
SDCBPO00560 RNU6-420P-201ENST00000458780 107 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AC107626.1-201ENST00000471084 183 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 RPS27P21-201ENST00000486977 252 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.65□□□□□ -2.15
SDCBPO00560 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.65□□□□□ -2.15
SDCBPO00560 AC113420.1-201ENST00000507903 571 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 MIR514B-201ENST00000516774 80 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.65□□□□□ -2.15
SDCBPO00560 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.65□□□□□ -2.15
SDCBPO00560 AC068339.2-201ENST00000534395 618 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.65□□□□□ -2.15
SDCBPO00560 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.65□□□□□ -2.15
SDCBPO00560 AL049838.1-201ENST00000563647 981 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AGGF1P5-201ENST00000567900 919 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.65□□□□□ -2.15
SDCBPO00560 AL356280.1-201ENST00000603614 379 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 KATNBL1P5-201ENST00000605015 517 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.65□□□□□ -2.15
SDCBPO00560 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.65□□□□□ -2.15
SDCBPO00560 AL031601.2-202ENST00000622650 282 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 AL356266.1-201ENST00000623311 483 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 CENPCP1-201ENST00000533085 2578 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SDCBPO00560 AC009487.4-201ENST00000624969 3585 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SDCBPO00560 AL359851.1-201ENST00000569460 4997 ntBASIC1.65□□□□□ -2.15
SDCBPO00560 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SDCBPO00560 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
SDCBPO00560 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SDCBPO00560 DEFB108F-201ENST00000344638 222 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RNU6-353P-201ENST00000364266 108 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 AL445529.1-201ENST00000398713 389 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.64□□□□□ -2.15
SDCBPO00560 AL355615.1-201ENST00000406187 641 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 SNORA3.2-201ENST00000408221 125 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RNU2-20P-201ENST00000410425 191 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RN7SKP223-201ENST00000410582 62 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 AC092634.6-201ENST00000418558 192 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC008173.1-201ENST00000418901 264 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.64□□□□□ -2.15
SDCBPO00560 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.64□□□□□ -2.15
SDCBPO00560 AL139413.1-201ENST00000421309 217 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 GTF2IP20-201ENST00000431663 360 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL139415.2-201ENST00000431968 163 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.64□□□□□ -2.15
SDCBPO00560 AC234064.1-201ENST00000436312 247 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 UBE2D3P1-201ENST00000436669 444 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL451074.3-201ENST00000437709 472 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.64□□□□□ -2.15
SDCBPO00560 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 AL096803.2-201ENST00000450032 677 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 MTND2P3-201ENST00000452458 470 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RNU7-23P-201ENST00000459465 62 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SDCBPO00560 MTAPP1-201ENST00000489154 819 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SDCBPO00560 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 NDUFB4P2-201ENST00000509515 391 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL359273.1-201ENST00000510918 627 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC008549.1-201ENST00000512900 643 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 SNORA48.9-201ENST00000516419 162 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 RNA5SP135-201ENST00000517019 125 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 HMGN1P28-201ENST00000521340 364 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.64□□□□□ -2.15
SDCBPO00560 DEFB108D-201ENST00000527787 222 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.64□□□□□ -2.15
SDCBPO00560 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SDCBPO00560 CR383656.7-201ENST00000548164 174 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.64□□□□□ -2.15
SDCBPO00560 AC023824.2-201ENST00000566185 400 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.64□□□□□ -2.15
SDCBPO00560 ZNF92P2-201ENST00000600543 1059 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL671309.1-201ENST00000603750 544 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC013553.2-201ENST00000604244 589 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AC012640.5-201ENST00000623897 319 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 AL590396.4-201ENST00000636779 956 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SDCBPO00560 ZNF658B-202ENST00000615961 3375 ntBASIC1.64□□□□□ -2.15
SDCBPO00560 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 HMGB1P5-201ENST00000255320 642 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 RNU6-1035P-201ENST00000384477 107 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 RSL24D1P4-201ENST00000400938 484 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.63□□□□□ -2.15
SDCBPO00560 EIF1AXP1-201ENST00000419267 435 ntBASIC1.63□□□□□ -2.15
SDCBPO00560 AC099548.1-201ENST00000421443 426 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms