Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-82P-201ENST00000363970 107 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RNU6-522P-201ENST00000364497 107 ntBASIC4.38□□□□□ -1.71
CBX4O00257 Y_RNA.530-201ENST00000384587 101 ntBASIC4.38□□□□□ -1.71
CBX4O00257 MIR23A-201ENST00000385245 73 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RNU6-1148P-201ENST00000410992 104 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RN7SKP140-201ENST00000411196 284 ntBASIC4.38□□□□□ -1.71
CBX4O00257 TOMM22P1-201ENST00000418578 312 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX4O00257 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX4O00257 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX4O00257 MRPL50P4-201ENST00000446432 475 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX4O00257 snoU13.4-201ENST00000458916 104 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX4O00257 DEFB109F-201ENST00000491870 277 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AC103851.1-201ENST00000506833 274 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AC008958.1-201ENST00000511047 682 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RNA5SP519-201ENST00000516480 119 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RNU6-1038P-201ENST00000516516 104 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AC105029.1-201ENST00000520250 669 ntBASIC4.38□□□□□ -1.71
CBX4O00257 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX4O00257 AP003730.1-201ENST00000524605 285 ntBASIC4.38□□□□□ -1.71
CBX4O00257 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX4O00257 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX4O00257 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.38□□□□□ -1.71
CBX4O00257 MIR5583-1-201ENST00000580941 59 ntBASIC4.38□□□□□ -1.71
CBX4O00257 MIR4742-201ENST00000581069 85 ntBASIC4.38□□□□□ -1.71
CBX4O00257 BNIP3P22-201ENST00000593399 556 ntBASIC4.38□□□□□ -1.71
CBX4O00257 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX4O00257 AC007687.1-201ENST00000602704 304 ntBASIC4.38□□□□□ -1.71
CBX4O00257 RMST_7.1-201ENST00000621935 268 ntBASIC4.38□□□□□ -1.71
CBX4O00257 TPTEP1-208ENST00000636884 213 ntBASIC4.38□□□□□ -1.71
CBX4O00257 MTND5P42-201ENST00000637720 498 ntBASIC4.38□□□□□ -1.71
CBX4O00257 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX4O00257 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CBX4O00257 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX4O00257 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CBX4O00257 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX4O00257 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX4O00257 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX4O00257 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CBX4O00257 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX4O00257 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX4O00257 RNU1-14P-201ENST00000362759 152 ntBASIC4.37□□□□□ -1.71
CBX4O00257 SNORA7.2-201ENST00000364446 145 ntBASIC4.37□□□□□ -1.71
CBX4O00257 Y_RNA.509-201ENST00000384506 99 ntBASIC4.37□□□□□ -1.71
CBX4O00257 Y_RNA.535-201ENST00000384612 99 ntBASIC4.37□□□□□ -1.71
CBX4O00257 SNORD66.1-201ENST00000391230 76 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AL122016.1-201ENST00000403365 367 ntBASIC4.37□□□□□ -1.71
CBX4O00257 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.37□□□□□ -1.71
CBX4O00257 NDUFB4P5-201ENST00000415445 361 ntBASIC4.37□□□□□ -1.71
CBX4O00257 USP9YP7-201ENST00000436723 430 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AC104058.1-201ENST00000448028 297 ntBASIC4.37□□□□□ -1.71
CBX4O00257 USP9YP32-201ENST00000452432 430 ntBASIC4.37□□□□□ -1.71
CBX4O00257 SCARNA18-201ENST00000459004 134 ntBASIC4.37□□□□□ -1.71
CBX4O00257 RNU6-329P-201ENST00000459618 107 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AC034236.1-201ENST00000469891 373 ntBASIC4.37□□□□□ -1.71
CBX4O00257 RN7SL691P-201ENST00000494487 301 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
CBX4O00257 FAM206BP-201ENST00000510179 541 ntBASIC4.37□□□□□ -1.71
CBX4O00257 TTC39CP1-201ENST00000512513 755 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AC112206.3-201ENST00000514578 389 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX4O00257 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX4O00257 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX4O00257 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX4O00257 AC005255.1-201ENST00000593748 216 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AL356055.1-201ENST00000602528 446 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AL022345.1-201ENST00000607292 135 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.37□□□□□ -1.71
CBX4O00257 AL132765.2-201ENST00000610812 351 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AL121757.2-201ENST00000611223 313 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.37□□□□□ -1.71
CBX4O00257 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX4O00257 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX4O00257 AL157700.1-201ENST00000561973 1432 ntBASIC4.37□□□□□ -1.71
CBX4O00257 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CBX4O00257 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX4O00257 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX4O00257 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX4O00257 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX4O00257 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CBX4O00257 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CBX4O00257 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CBX4O00257 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX4O00257 RNU6-288P-201ENST00000363690 104 ntBASIC4.36□□□□□ -1.71
CBX4O00257 Y_RNA.813-201ENST00000364639 102 ntBASIC4.36□□□□□ -1.71
CBX4O00257 Y_RNA.378-201ENST00000365652 113 ntBASIC4.36□□□□□ -1.71
CBX4O00257 RNU6-1013P-201ENST00000384180 107 ntBASIC4.36□□□□□ -1.71
CBX4O00257 CISD1P1-201ENST00000393907 327 ntBASIC4.36□□□□□ -1.71
CBX4O00257 AL022722.2-201ENST00000402519 180 ntBASIC4.36□□□□□ -1.71
CBX4O00257 LAP3P1-201ENST00000403648 294 ntBASIC4.36□□□□□ -1.71
CBX4O00257 AL513331.1-201ENST00000411908 397 ntBASIC4.36□□□□□ -1.71
CBX4O00257 AC080125.1-201ENST00000414888 684 ntBASIC4.36□□□□□ -1.71
CBX4O00257 AL451054.2-201ENST00000420896 202 ntBASIC4.36□□□□□ -1.71
CBX4O00257 HSPE1P1-201ENST00000421494 318 ntBASIC4.36□□□□□ -1.71
CBX4O00257 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.36□□□□□ -1.71
CBX4O00257 RPL23AP81-201ENST00000455252 467 ntBASIC4.36□□□□□ -1.71
CBX4O00257 PPP1R2P5-201ENST00000457256 603 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms