Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNA5SP107-201ENST00000411358 122 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL353678.1-201ENST00000422735 741 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL590383.1-201ENST00000428602 75 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL390023.1-201ENST00000428836 262 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC009237.8-201ENST00000445492 379 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 Z75741.1-201ENST00000446793 314 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC010631.1-201ENST00000474150 156 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 RPL30P14-201ENST00000482744 348 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC109486.1-201ENST00000486833 374 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 RPL21P13-201ENST00000488305 481 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC114967.1-201ENST00000504890 259 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC114797.1-201ENST00000514003 728 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC119751.5-201ENST00000514077 770 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 SCARNA15.2-201ENST00000516409 127 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC124947.2-202ENST00000552735 133 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 MIR548AB-201ENST00000584917 84 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC011471.1-201ENST00000585766 187 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC083760.1-201ENST00000589621 670 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 Z99497.2-201ENST00000603634 310 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC108747.1-201ENST00000609508 535 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC103710.1-201ENST00000610003 901 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC245517.5-201ENST00000611529 162 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 SDR42E1P2-201ENST00000614861 481 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC104010.1-201ENST00000616889 150 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL356321.1-201ENST00000621360 228 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC027309.3-201ENST00000623419 351 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 AC010149.2-201ENST00000637608 315 ntBASIC3□□□□□ -1.93
NPIPA3F8WFD2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPA3F8WFD2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPIPA3F8WFD2 AL079305.1-201ENST00000623159 3008 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 RNU5A-8P-201ENST00000364102 114 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 SNORA1.3-201ENST00000384676 136 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 SNORA48.5-201ENST00000391143 135 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL021407.1-201ENST00000404531 386 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 RNA5SP38-201ENST00000410750 119 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 USP9YP13-201ENST00000417797 480 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 RPL7P46-201ENST00000425129 740 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 TIMM9P1-201ENST00000436122 256 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL671855.1-201ENST00000446875 1203 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL590664.1-201ENST00000448065 339 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC108059.3-201ENST00000456388 214 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 HMGN2P13-201ENST00000476476 274 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 RNU6-201P-201ENST00000517100 61 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 RNU6-64P-201ENST00000517119 105 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 DEFB108A-201ENST00000530110 222 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC008507.1-201ENST00000587506 734 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AL133393.1-201ENST00000603277 287 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC121247.2-201ENST00000604776 136 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC121334.2-201ENST00000605387 271 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC012360.2-201ENST00000609349 391 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC013476.2-201ENST00000614456 459 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 AC068057.2-201ENST00000624047 895 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.99□□□□□ -1.93
NPIPA3F8WFD2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.98□□□□□ -1.93
NPIPA3F8WFD2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPA3F8WFD2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NPIPA3F8WFD2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPIPA3F8WFD2 MIR30E-201ENST00000362104 92 ntBASIC2.98□□□□□ -1.93
NPIPA3F8WFD2 RNA5SP374-201ENST00000362939 125 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms