Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 OR5H15-201ENST00000383696 930 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 Y_RNA.559-201ENST00000384686 107 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 RPS3AP36-201ENST00000398190 775 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 TXNP7-201ENST00000406296 293 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC007899.1-201ENST00000412776 775 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC007283.2-201ENST00000424739 197 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 ISCA1P6-201ENST00000427740 390 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC104850.1-201ENST00000435940 476 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC010631.1-201ENST00000474150 156 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC068587.1-201ENST00000483613 781 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 RPL21P13-201ENST00000488305 481 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AL049874.1-201ENST00000489560 388 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 RNA5SP217-201ENST00000515959 91 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 RNA5SP337-201ENST00000517007 109 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 RNU6-840P-201ENST00000517275 65 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC068657.1-201ENST00000520807 306 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AL845331.3-202ENST00000562856 261 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AL451064.1-201ENST00000607718 471 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AP002826.1-201ENST00000608835 315 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC008498.1-201ENST00000613012 531 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC039056.2-201ENST00000622261 511 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC139792.2-201ENST00000624218 587 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 AC091903.1-201ENST00000624322 454 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 PISRT1-201ENST00000626175 531 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 MIR4275-201ENST00000636486 87 ntBASIC3.52□□□□□ -1.85
LRRC53A6NM62 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRRC53A6NM62 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
LRRC53A6NM62 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LRRC53A6NM62 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC53A6NM62 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC53A6NM62 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 RPL23AP32-201ENST00000395315 459 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 U3.42-201ENST00000408746 214 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 RNU2-62P-201ENST00000410868 191 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 BX323014.1-201ENST00000412876 237 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 BX842559.1-201ENST00000419615 532 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 UBE2D3P2-201ENST00000424409 445 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC53A6NM62 USP9YP14-201ENST00000430663 563 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC53A6NM62 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 GAPDHP27-201ENST00000447427 1020 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 MTND1P12-201ENST00000455231 147 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 KLF3P2-201ENST00000465138 268 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 RPL31P60-201ENST00000478450 367 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC093663.1-201ENST00000497190 394 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 GMPSP1-201ENST00000514075 579 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC012213.3-201ENST00000577199 777 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 MTND1P15-201ENST00000579262 949 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 MIR3682-201ENST00000581338 84 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 AL606834.2-201ENST00000602954 668 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 DUXAP4-201ENST00000603046 613 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC008277.2-201ENST00000605196 797 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AP000254.1-201ENST00000609934 520 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC103710.1-201ENST00000610003 901 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AL110115.1-201ENST00000614396 364 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 CR392039.5-201ENST00000623201 510 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC53A6NM62 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRRC53A6NM62 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.51□□□□□ -1.85
LRRC53A6NM62 FARSBP1-201ENST00000435808 1778 ntBASIC3.51□□□□□ -1.85
LRRC53A6NM62 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRRC53A6NM62 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRRC53A6NM62 OR5J1P-201ENST00000313544 939 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 MIR148B-201ENST00000362252 99 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms