Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RPL7P46-201ENST00000425129 740 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 NEFMP1-201ENST00000443423 1006 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 SNRPFP3-201ENST00000457792 225 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC012158.1-204ENST00000483430 465 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 RPL31P13-201ENST00000484151 370 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 RN7SL323P-201ENST00000494712 295 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC023141.12-201ENST00000512399 199 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 SNRPGP16-201ENST00000533275 226 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 MIR3921-201ENST00000577308 85 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AC011712.1-201ENST00000588959 234 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AL117336.2-201ENST00000602435 335 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 MIR6133-201ENST00000617057 108 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 MIR6891-201ENST00000618788 93 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 FP236240.3-201ENST00000623061 327 ntBASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC85CA6NKD9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 Y_RNA.263-201ENST00000364659 114 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 HSPD1P16-201ENST00000402302 394 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AP000580.1-201ENST00000404439 358 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AL606923.1-201ENST00000406616 190 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 RPS20P14-201ENST00000412545 360 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 ARL5AP1-201ENST00000418991 388 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 RPL7AP61-201ENST00000443410 636 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 snoU13.4-201ENST00000458916 104 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 RPL21P8-201ENST00000465083 535 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC092451.1-201ENST00000480211 153 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC104806.1-201ENST00000508720 308 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC005921.1-201ENST00000510589 286 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 RNU6-927P-201ENST00000516199 100 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 PSMA2P1-201ENST00000526365 646 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 RANP3-201ENST00000530970 276 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AL137161.1-201ENST00000532231 390 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AL355836.1-201ENST00000555951 870 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 MED28P6-201ENST00000558776 231 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 C8orf59P2-201ENST00000603441 271 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 Y_RNA.804-201ENST00000615262 101 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 MTND5P42-201ENST00000637720 498 ntBASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC85CA6NKD9 AC000123.3-201ENST00000624029 4975 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RNU6-845P-201ENST00000362578 103 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RNU6-522P-201ENST00000364497 107 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 MIR607-201ENST00000385241 96 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RNU6-550P-201ENST00000391057 101 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RNU6-332P-201ENST00000391193 108 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AL162578.1-201ENST00000406202 378 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AL513331.1-201ENST00000411908 397 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AC009161.1-201ENST00000417306 376 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RPL23AP31-201ENST00000456160 467 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AF213884.1-201ENST00000488102 463 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 RN7SKP60-201ENST00000516985 239 ntBASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC85CA6NKD9 AC023050.3-201ENST00000541142 333 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms