Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 SNORA18.3-201ENST00000384122 132 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL138885.1-201ENST00000405921 675 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 RNU6-920P-201ENST00000410926 92 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 CCDC58P2-201ENST00000417131 366 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 TIMM9P2-201ENST00000419324 266 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL139132.1-201ENST00000431587 344 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 TAF9P1-201ENST00000445421 515 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 TAF9P2-201ENST00000454958 515 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL031183.1-201ENST00000457667 207 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AP001025.2-201ENST00000490908 477 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 RPF2P2-201ENST00000504693 896 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AC006499.2-201ENST00000513470 337 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AP002404.1-201ENST00000532005 451 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 PIGPP4-201ENST00000584447 307 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AL356596.1-201ENST00000624230 379 ntBASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM49BA6NDI0 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.92
TRIM49BA6NDI0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM49BA6NDI0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.09□□□□□ -1.92
TRIM49BA6NDI0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 GNG5P1-201ENST00000255500 204 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 RNU6-799P-201ENST00000363567 107 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 RNU6-1122P-201ENST00000384449 107 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 Y_RNA.548-201ENST00000384656 105 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 MIR135A2-201ENST00000384854 100 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 TPMTP3-201ENST00000411928 735 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 RPL35AP12-201ENST00000425362 338 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC007742.1-201ENST00000425789 329 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 SETP8-201ENST00000435341 628 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 ELOCP26-201ENST00000436067 329 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AL353691.1-201ENST00000451332 387 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 KATNBL1P6-201ENST00000453433 915 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC022483.1-201ENST00000514020 567 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 DEFB131D-201ENST00000526803 184 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 HPRT1P3-201ENST00000539521 576 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 CYCSP39-201ENST00000565821 309 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 MIR4325-201ENST00000583049 90 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC122133.1-201ENST00000613964 233 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC025588.4-201ENST00000615802 908 ntBASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM49BA6NDI0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 RPL21P132-201ENST00000331267 462 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 RNU6-289P-201ENST00000364093 107 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 RNU6-253P-201ENST00000384730 105 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 SNORA26.8-201ENST00000391306 124 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 MTCYBP38-201ENST00000417160 1123 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 MTCO2P16-201ENST00000436962 677 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 MTND4P6-201ENST00000438297 472 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 AL513043.1-201ENST00000439124 535 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 MTND2P20-201ENST00000440805 661 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 MRPL50P4-201ENST00000446432 475 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 AC234775.1-201ENST00000454247 670 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 RNU7-136P-201ENST00000458819 69 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 AC091179.1-201ENST00000461606 579 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 AL049714.1-201ENST00000466686 347 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 RPL7P5-201ENST00000471472 736 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 RPL9P33-201ENST00000484311 566 ntBASIC3.07□□□□□ -1.92
TRIM49BA6NDI0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms