Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC073413.2-201ENST00000604332 360 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 FO624990.1-201ENST00000636373 85 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 SNORA51.2-201ENST00000364595 132 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AL030996.1-201ENST00000411430 235 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC018630.2-202ENST00000422992 927 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 HMGN2P38-201ENST00000423806 265 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 OR10R1P-201ENST00000441524 1141 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 UBBP3-201ENST00000445497 241 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC022447.3-201ENST00000506865 495 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC008837.2-201ENST00000513076 418 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 HMGB1P46-201ENST00000520062 610 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AC009220.3-201ENST00000604318 586 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 RNU6-1180P-201ENST00000364935 107 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AL078601.1-201ENST00000444542 271 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 Z96811.1-201ENST00000445880 108 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC107032.1-201ENST00000485945 480 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 MIR3690-201ENST00000580266 75 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 Y_RNA.258-201ENST00000364613 105 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 ANAPC10P1-201ENST00000395991 556 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AIMP1P2-201ENST00000425294 312 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 CKS1BP5-201ENST00000434172 273 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 MTCO3P44-201ENST00000510977 541 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 MTCO2P32-201ENST00000514865 403 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 RNU4-60P-201ENST00000517239 135 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC245128.3-201ENST00000594721 748 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AC008083.4-201ENST00000615076 444 ntBASIC1.29□□□□□ -2.2
CNOT1A5YKK6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.29□□□□□ -2.2
CNOT1A5YKK6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 VTRNA1-3-201ENST00000365645 89 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC013268.2-201ENST00000420753 337 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 MTATP6P4-201ENST00000427725 675 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 RNA5SP82-201ENST00000516707 92 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 RNA5SP468-201ENST00000516782 93 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 HSPE1P4-201ENST00000550617 308 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 IMMP1LP2-201ENST00000552954 492 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 CBX3P2-202ENST00000583365 535 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AL590099.1-201ENST00000615276 138 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC104307.1-201ENST00000616142 196 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 SNORA14A-201ENST00000364773 135 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC083806.3-201ENST00000614016 455 ntBASIC1.28□□□□□ -2.2
CNOT1A5YKK6 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 HSPE1P11-201ENST00000339579 310 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RNU6-105P-201ENST00000363909 104 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RNU6-115P-201ENST00000364310 107 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RNA5SP105-201ENST00000391123 113 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 Z75741.2-201ENST00000417272 1167 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RPL30P6-201ENST00000475925 342 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 AC105313.1-201ENST00000509121 353 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 LRRC34P2-201ENST00000514850 553 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RNA5SP436-201ENST00000516020 115 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 MIR4446-201ENST00000578505 67 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RNU4-7P-201ENST00000364758 141 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 AL512504.1-201ENST00000415494 778 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 MTND1P23-201ENST00000416931 372 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 CBX3P6-201ENST00000430257 527 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 RNU6-113P-201ENST00000516653 101 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 DUXAP5-201ENST00000529668 529 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms